SEED Subsystem: Nitrate and nitrite ammonification in Ralstonia sp. UNC404CL21Col

Experiments:

Role Gene Name  
Assimilatory nitrate reductase large subunit (EC:1.7.99.4) ABZR87_RS18885
Cytochrome c nitrite reductase, small subunit NrfH No genes
Cytochrome c-type heme lyase subunit nrfE, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfF, nitrite reductase complex assembly No genes
Cytochrome c-type heme lyase subunit nrfG, nitrite reductase complex assembly No genes
Cytochrome c-type protein NapC No genes
Cytochrome c-type protein NrfB precursor No genes
Cytochrome c552 precursor (EC 1.7.2.2) No genes
Ferredoxin--nitrite reductase (EC 1.7.7.1) No genes
Ferredoxin-type protein NapF (periplasmic nitrate reductase) No genes
Ferredoxin-type protein NapG (periplasmic nitrate reductase) No genes
Nitrate ABC transporter, ATP-binding protein ABZR87_RS06890
Nitrate ABC transporter, nitrate-binding protein ABZR87_RS06900
Nitrate ABC transporter, permease protein No genes
Nitrate reductase cytochrome c550-type subunit No genes
Nitrate/nitrite response regulator protein No genes
Nitrate/nitrite sensor protein (EC 2.7.3.-) No genes
Nitrate/nitrite transporter ABZR87_RS01525
  ABZR87_RS05260
  ABZR87_RS05515
  ABZR87_RS08160
  ABZR87_RS16120
  ABZR87_RS17545
  ABZR87_RS17550
  ABZR87_RS18865
Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4) ABZR87_RS18870
  ABZR87_RS18880
Nitrite reductase [NAD(P)H] small subunit (EC 1.7.1.4) ABZR87_RS18875
Nitrite reductase probable [NAD(P)H] subunit (EC 1.7.1.4) No genes
Nitrite reductase probable electron transfer 4Fe-S subunit (EC 1.7.1.4) No genes
Nitrite transporter NirC No genes
Nitrite transporter from formate/nitrite family No genes
NrfC protein No genes
NrfD protein No genes
Periplasmic nitrate reductase component NapD No genes
Periplasmic nitrate reductase component NapE No genes
Periplasmic nitrate reductase component NapL No genes
Periplasmic nitrate reductase precursor (EC 1.7.99.4) No genes
Polyferredoxin NapH (periplasmic nitrate reductase) No genes
Putative thiol:disulfide oxidoreductase, nitrite reductase complex assembly No genes
Respiratory nitrate reductase alpha chain (EC 1.7.99.4) No genes
Respiratory nitrate reductase beta chain (EC 1.7.99.4) No genes
Respiratory nitrate reductase delta chain (EC 1.7.99.4) No genes
Respiratory nitrate reductase gamma chain (EC 1.7.99.4) No genes
Respiratory nitrate reductase subunit, conjectural (EC 1.7.99.4) No genes
Response regulator NasT ABZR87_RS06910

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