SEED Subsystem: KDO2-Lipid A biosynthesis in Ralstonia sp. UNC404CL21Col

Experiments:

Role Gene Name  
2-Keto-3-deoxy-D-manno-octulosonate-8-phosphate synthase (EC 2.5.1.55) ABZR87_RS10460
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (EC 3.1.3.45) ABZR87_RS07080
3-deoxy-D-manno-octulosonic-acid transferase (EC 2.-.-.-) No genes
3-deoxy-manno-octulosonate cytidylyltransferase (EC 2.7.7.38) ABZR87_RS00735
Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase (EC 2.3.1.129) ABZR87_RS11885
Arabinose 5-phosphate isomerase (EC 5.3.1.13) ABZR87_RS07085
LPS-assembly lipoprotein RlpB precursor (Rare lipoprotein B) ABZR87_RS01405
Lipid A biosynthesis (KDO) 2-(lauroyl)-lipid IVA acyltransferase (EC 2.3.1.-) No genes
Lipid A biosynthesis lauroyl acyltransferase (EC 2.3.1.-) ABZR87_RS05570
  ABZR87_RS05575
  ABZR87_RS18395
Lipid A export ATP-binding/permease protein MsbA (EC 3.6.3.25) No genes
Lipid-A-disaccharide synthase (EC 2.4.1.182) ABZR87_RS11890
Lipopolysaccharide ABC transporter, ATP-binding protein LptB ABZR87_RS07065
LptA, protein essential for LPS transport across the periplasm ABZR87_RS07070
O-antigen flippase Wzx No genes
Oligosaccharide repeat unit polymerase Wzy No genes
Predicted hydrolase of the metallo-beta-lactamase superfamily, clustered with KDO2-Lipid A biosynthesis genes No genes
Protein of unknown function DUF1009 clustered with KDO2-Lipid A biosynthesis genes No genes
Tetraacyldisaccharide 4'-kinase (EC 2.7.1.130) ABZR87_RS00725
UDP-2,3-diacylglucosamine hydrolase (EC 3.6.1.-) No genes
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase (EC 3.5.1.-) No genes
UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase (EC 2.3.1.-) No genes
UDP-N-acetylglucosamine 4-epimerase (EC 5.1.3.7) No genes
regulator of length of O-antigen component of lipopolysaccharide chains No genes

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