SEED Subsystem: Polyamine Metabolism in Paraburkholderia bryophila 376MFSha3.1

Experiments:

Role Gene Name  
4-aminobutyraldehyde dehydrogenase (EC 1.2.1.19) No genes
5'-methylthioadenosine nucleosidase (EC 3.2.2.16) H281DRAFT_04470
ABC transporter, periplasmic spermidine putrescine-binding protein PotD (TC 3.A.1.11.1) H281DRAFT_00654
  H281DRAFT_01521
  H281DRAFT_01539
  H281DRAFT_03507
  H281DRAFT_04947
  H281DRAFT_05408
  H281DRAFT_05495
  H281DRAFT_05501
Agmatinase (EC 3.5.3.11) H281DRAFT_00178
  H281DRAFT_04466
Agmatine deiminase (EC 3.5.3.12) No genes
Agmatine/putrescine antiporter, associated with agmatine catabolism No genes
Arginine decarboxylase (EC 4.1.1.19) No genes
Arginine decarboxylase, catabolic (EC 4.1.1.19) No genes
Arginine/agmatine antiporter No genes
Arginine/ornithine antiporter No genes
Arginine/ornithine antiporter ArcD No genes
Biosynthetic arginine decarboxylase (EC 4.1.1.19) No genes
Carbamate kinase (EC 2.7.2.2) No genes
Carboxynorspermidine decarboxylase, putative (EC 4.1.1.-) No genes
Carboxynorspermidine dehydrogenase, putative (EC 1.1.1.-) No genes
DNA-binding response regulator, LuxR family, near polyamine transporter H281DRAFT_03107
  H281DRAFT_06603
N-carbamoylputrescine amidase (3.5.1.53) No genes
Ornithine decarboxylase (EC 4.1.1.17) No genes
Predicted chaperone lipoprotein YacC, potentially involved in protein secretion No genes
Predicted polyamine sensor NspS, involved in biofilm formation No genes
Probable spermidine/putrescine substrate binding protein in Mollicutes No genes
Probable two-component sensor, near polyamine transporter No genes
Putative GntR-family regulatory protein and aminotransferase near polyamine transporter H281DRAFT_01022
  H281DRAFT_03509
Putrescine ABC transporter putrescine-binding protein PotF (TC 3.A.1.11.2) H281DRAFT_05180
Putrescine carbamoyltransferase (EC 2.1.3.6) No genes
Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) H281DRAFT_00655
  H281DRAFT_01546
  H281DRAFT_03508
  H281DRAFT_04946
  H281DRAFT_05405
  H281DRAFT_05492
  H281DRAFT_05530
Putrescine transport ATP-binding protein PotG (TC 3.A.1.11.2) H281DRAFT_05181
Putrescine transport system permease protein PotH (TC 3.A.1.11.2) H281DRAFT_05182
  H281DRAFT_05532
Putrescine transport system permease protein PotI (TC 3.A.1.11.2) H281DRAFT_05183
Putrescine-ornithine antiporter No genes
Putrescine/proton symporter, putrescine/ornithine antiporter PotE No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), eukaryotic No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1A No genes
S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50), prokaryotic class 1B No genes
Spermidine N1-acetyltransferase (EC 2.3.1.57) No genes
Spermidine Putrescine ABC transporter permease component PotB (TC 3.A.1.11.1) H281DRAFT_00656
  H281DRAFT_01543
  H281DRAFT_04948
  H281DRAFT_05500
  H281DRAFT_06600
Spermidine Putrescine ABC transporter permease component potC (TC_3.A.1.11.1) H281DRAFT_04949
  H281DRAFT_05499
  H281DRAFT_06601
Spermidine synthase (EC 2.5.1.16) H281DRAFT_00281
  H281DRAFT_01407
  H281DRAFT_06313
Transcriptional regulator of catabolic arginine decarboxylase (adiA) No genes
Transcriptional regulator, MerR family, near polyamine transporter No genes
Transcriptional regulator, TetR family, associated with agmatine catabolism No genes
Transcriptional regulator, luxR family, associated with agmatine catabolism No genes

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