SEED Subsystem: DNA Repair Base Excision in Paraburkholderia bryophila 376MFSha3.1

Experiments:

Role Gene Name  
ATP-dependent DNA ligase (EC 6.5.1.1) No genes
ATP-dependent DNA ligase (EC 6.5.1.1) LigC H281DRAFT_02819
ATP-dependent DNA ligase (EC 6.5.1.1) clustered with Ku protein, LigD H281DRAFT_00864
  H281DRAFT_01036
  H281DRAFT_01037
  H281DRAFT_06196
DNA ligase (EC 6.5.1.2) H281DRAFT_00604
DNA polymerase I (EC 2.7.7.7) H281DRAFT_06022
DNA polymerase II (EC 2.7.7.7) H281DRAFT_01369
DNA-3-methyladenine glycosylase (EC 3.2.2.20) H281DRAFT_05730
DNA-3-methyladenine glycosylase II (EC 3.2.2.21) H281DRAFT_00547
  H281DRAFT_02338
  H281DRAFT_05412
Endonuclease III (EC 4.2.99.18) H281DRAFT_00293
Endonuclease VIII No genes
Exodeoxyribonuclease I (EC 3.1.11.1) No genes
Flap structure-specific endonuclease (EC 3.-.-.-) No genes
Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) H281DRAFT_01934
Ku domain protein H281DRAFT_00862
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) H281DRAFT_00488
Single-stranded-DNA-specific exonuclease RecJ, clostridial paralog No genes
Single-stranded-DNA-specific exonuclease RecJ, cyanobacterial paralog No genes
Uracil-DNA glycosylase, family 1 H281DRAFT_05710

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