SEED Subsystem: CO2 uptake, carboxysome in Paraburkholderia bryophila 376MFSha3.1

Experiments:

Role Gene Name  
Bicarbonate transport system permease protein No genes
Bicarbonate transporter, bicarbonate binding protein No genes
Bicarbonate transporter, bicarbonate binding protein 2 No genes
Carbon dioxide concentrating mechanism protein CcmL No genes
Carbon dioxide concentrating mechanism protein CcmM No genes
Carbon dioxide concentrating mechanism protein CcmN No genes
Carbon dioxide concentrating mechanism protein CcmO No genes
Carboxysome protein CcmL No genes
Carboxysome protein CcmM No genes
Carboxysome protein CcmN No genes
High-affnity carbon uptake protein Hat/HatR H281DRAFT_03950
Hypothetical transmembrane protein coupled to NADH-ubiquinone oxidoreductase chain 5 homolog No genes
Low-affinity CO2 hydration protein CphX No genes
NADH dehydrogenase subunit 4, Involved in CO2 fixation No genes
NADH dehydrogenase subunit 5, Involved in CO2 fixation No genes
Possible RuBisCo chaperonin RbcX No genes
Possible carbon dioxide concentrating mechanism protein CcmK No genes
Possible pterin-4 alpha-carbinolamine dehydratase-like protein No genes
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) H281DRAFT_01317
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) H281DRAFT_01316
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
RuBisCO operon transcriptional regulator No genes
RuBisCO operon transcriptional regulator CbbR No genes
Rubisco activation protein CbbO No genes
Rubisco activation protein CbbQ No genes
Sensory subunit of low CO2-induced protein complex, putative No genes
carboxysome shell protein CsoS1 No genes
carboxysome shell protein CsoS2 No genes
carboxysome shell protein CsoS3 No genes
probable RuBisCo-expression protein CbbX H281DRAFT_01315
putative carboxysome peptide A No genes
putative carboxysome peptide B No genes
putative sodium-dependent bicarbonate transporter No genes
ribulose 1,5-bisphosphate carboxylase/oxygenase activase No genes

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