SEED Subsystem: Isoprenoid Biosynthesis in Bacteroides thetaiotaomicron VPI-5482

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate reductoisomerase (EC 1.1.1.267) BT2002
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) BT1403
  BT4099
1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase (EC 1.17.7.1) BT2517
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC 4.6.1.12) BT3884
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase (EC 2.7.7.60) BT1651
  BT2881
  BT3923
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC 2.7.1.148) BT0624
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC 1.17.1.2) BT2061
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Candidate gene for the hypothesized phosphomevalonate decarboxylase No genes
Dimethylallyltransferase (EC 2.5.1.1) No genes
Diphosphomevalonate decarboxylase (EC 4.1.1.33) No genes
Geranyltranstransferase (farnesyldiphosphate synthase) (EC 2.5.1.10) No genes
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34) No genes
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10) No genes
Isopentenyl phosphate kinase No genes
Isopentenyl-diphosphate delta-isomerase (EC 5.3.3.2) BT3972
  BT4191
Isopentenyl-diphosphate delta-isomerase, FMN-dependent (EC 5.3.3.2) No genes
Mevalonate kinase (EC 2.7.1.36) No genes
Phosphomevalonate kinase (EC 2.7.4.2) No genes
Undecaprenyl pyrophosphate synthetase (EC 2.5.1.31) No genes

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