SEED Subsystem: Thiamin biosynthesis in Bifidobacterium breve UCC2003

Experiments:

Role Gene Name  
1-deoxy-D-xylulose 5-phosphate synthase (EC 2.2.1.7) BBR_RS13285
5-FCL-like protein No genes
ATPase component YkoD of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
Additional substrate-binding component of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine No genes
Cysteine desulfurase (EC 2.8.1.7), IscS subfamily No genes
Glycine oxidase ThiO (EC 1.4.3.19) No genes
Hydroxyethylthiazole kinase (EC 2.7.1.50) BBR_RS17200
Hydroxymethylpyrimidine ABC transporter, ATPase component No genes
Hydroxymethylpyrimidine ABC transporter, substrate-binding component BBR_RS13785
Hydroxymethylpyrimidine ABC transporter, transmembrane component BBR_RS13780
Hydroxymethylpyrimidine synthesis protein THI5 No genes
Phosphomethylpyrimidine kinase (EC 2.7.4.7) No genes
Predicted hydroxymethylpyrimidine transporter CytX No genes
Predicted thiamin transporter PnuT No genes
Predicted thiamin transporter ThiT No genes
Predicted thiazole transporter ThiU No genes
Putative cysteine desulfurase, associated with tRNA 4-thiouridine synthase No genes
Rhodanese-like domain required for thiamine synthesis No genes
Substrate-specific component ThiT of thiamin ECF transporter No genes
Substrate-specific component ThiW of predicted thiazole ECF transporter No genes
Substrate-specific component YkoE of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine BBR_RS13850
  BBR_RS17530
Sulfur carrier protein ThiS BBR_RS13960
Sulfur carrier protein adenylyltransferase ThiF BBR_RS13970
  BBR_RS13975
Thiamin ABC transporter, ATPase component No genes
Thiamin ABC transporter, substrate-binding component No genes
Thiamin ABC transporter, transmembrane component BBR_RS12100
Thiamin biosynthesis protein ThiC BBR_RS17205
Thiamin pyrophosphokinase (EC 2.7.6.2) BBR_RS16785
Thiamin transport gene THI10 No genes
Thiamin-phosphate phosphatase (EC 3.1.3.-) No genes
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) BBR_RS17205
Thiamin-phosphate synthase ThiN (EC 2.5.1.3) No genes
Thiamin-regulated hypothetical deacetylase No genes
Thiamin-regulated outer membrane receptor Omr1 No genes
Thiaminase II (EC 3.5.99.2) No genes
Thiamine kinase (EC 2.7.1.89) No genes
Thiamine-monophosphate kinase (EC 2.7.4.16) No genes
Thiazole biosynthesis protein ThiG BBR_RS13965
Thiazole biosynthesis protein ThiH No genes
Thiazole biosynthetic enzyme Thi4 No genes
Transmembrane component YkoC of energizing module of thiamin-regulated ECF transporter for HydroxyMethylPyrimidine BBR_RS13860
YjbQ (alternate ThiE) No genes
tRNA S(4)U 4-thiouridine synthase (former ThiI) No genes

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