SEED Subsystem: NAD and NADP cofactor biosynthesis global in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name  
3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) BPHYT_RS07265
ADP-ribose pyrophosphatase (EC 3.6.1.13) BPHYT_RS06700
Amidases related to nicotinamidase BPHYT_RS16185
  BPHYT_RS20870
  BPHYT_RS26090
C-terminal domain of CinA type S No genes
C-terminal domain of CinA type S homolog No genes
Glutamine amidotransferase chain of NAD synthetase BPHYT_RS05480
Indoleamine 2,3-dioxygenase (EC 1.13.11.52) No genes
Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis No genes
Kynureninase (EC 3.7.1.3) BPHYT_RS07275
  BPHYT_RS16030
Kynurenine 3-monooxygenase (EC 1.14.13.9) No genes
Kynurenine formamidase (EC 3.5.1.9) No genes
Kynurenine formamidase, bacterial (EC 3.5.1.9) BPHYT_RS09685
  BPHYT_RS16025
Kynurenine formamidase, yeast-type BNA7 (EC 3.5.1.9) No genes
L-Aspartate dehydrogenase (EC 1.4.1.21) No genes
L-aspartate oxidase (EC 1.4.3.16) BPHYT_RS15640
N-Ribosylnicotinamide phosphorylase (EC 2.4.2.1) No genes
NAD kinase (EC 2.7.1.23) BPHYT_RS03565
NAD pyrophosphatase, periplasmic (EC 3.6.1.22) No genes
NAD synthetase (EC 6.3.1.5) BPHYT_RS05480
  BPHYT_RS23720
NAD transporter of endosymbionts, possible No genes
NMN 5'-nucleotidase, extracellular (EC 3.1.3.5) No genes
NMN phosphatase (EC 3.1.3.5) No genes
NMN synthetase (EC 6.3.1.-) No genes
NadR transcriptional regulator No genes
Niacin transporter NiaP BPHYT_RS10360
  BPHYT_RS23085
  BPHYT_RS25130
  BPHYT_RS25675
Niacin transporter in yeast, DAL5 family No genes
Nicotinamidase (EC 3.5.1.19) No genes
Nicotinamidase family protein YcaC No genes
Nicotinamidase/isochorismatase family protein BPHYT_RS28815
Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) BPHYT_RS26895
Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1) No genes
Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), eukaryotic PNAT family No genes
Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) No genes
Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) No genes
Nicotinate phosphoribosyltransferase (EC 2.4.2.11) BPHYT_RS14535
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) BPHYT_RS06395
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), eukaryotic PNAT family No genes
Nicotinate-nucleotide adenylyltransferase, NadM family (EC 2.7.7.18) No genes
Nicotine adenine dinucleotide glycohydrolase (NADGH) (EC 3.2.2.5) No genes
Nudix-related transcriptional regulator NrtR No genes
Predicted N-ribosylNicotinamide CRP-like regulator No genes
Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) BPHYT_RS15645
Quinolinate synthetase (EC 2.5.1.72) BPHYT_RS15650
Ribosyl nicotinamide transporter, PnuC-like No genes
Ribosylnicotinamide kinase (EC 2.7.1.22) No genes
Ribosylnicotinamide kinase, eukaryotic (EC 2.7.1.22) No genes
Substrate-specific component NiaX of predicted niacin ECF transporter No genes
Transcriptional repressor for NAD biosynthesis in gram-positives No genes
Tryptophan 2,3-dioxygenase (EC 1.13.11.11) BPHYT_RS16035

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