SEED Subsystem: L-Arabinose utilization in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name  
2-ketoglutaric semialdehyde dehydrogenase (EC 1.2.1.26) BPHYT_RS10925
  BPHYT_RS19710
  BPHYT_RS28770
Alpha-L-arabinofuranosidase II precursor (EC 3.2.1.55) No genes
Alpha-N-arabinofuranosidase (EC 3.2.1.55) No genes
Alpha-N-arabinofuranosidase 2 (EC 3.2.1.55) No genes
Alpha-N-arabinofuranosidase II (EC 3.2.1.55) No genes
Alpha-arabinosides ABC transport system, permease protein 1 No genes
Alpha-arabinosides ABC transport system, permease protein 2 No genes
Alpha-arabinosides ABC transport system, substrate-binding protein No genes
Alternative L-arabinose isomerase (EC 5.3.1.4) No genes
Arabinan endo-1,5-alpha-L-arabinosidase (EC 3.2.1.99) No genes
Arabinose operon protein AraL No genes
Arabinose operon regulatory protein No genes
Arabinose-proton symporter No genes
Arabinose-regulated TonB-dependent outer membrane receptor No genes
Hypothetical glycoside hydrolase, family 43, similar to arabinosidase No genes
Hypothetical phosphoglucomutase family hydrolase in arabinose utilization cluster No genes
L-2-keto-3-deoxyarabonate dehydratase (EC 4.2.1.43) BPHYT_RS22715
L-arabinolactonase (EC 3.1.1.15) BPHYT_RS16915
L-arabinose 1-dehydrogenase (EC 1.1.1.46) No genes
L-arabinose isomerase (EC 5.3.1.4) No genes
L-arabinose transport ATP-binding protein AraG (TC 3.A.1.2.2) BPHYT_RS16930
  BPHYT_RS19720
L-arabinose transport system permease protein (TC 3.A.1.2.2) BPHYT_RS16925
  BPHYT_RS19725
L-arabinose-binding periplasmic protein precursor AraF (TC 3.A.1.2.2) BPHYT_RS16935
  BPHYT_RS19715
L-arabinose-specific 1-epimerase (mutarotase) No genes
L-arabonate dehydratase (EC 4.2.1.25) BPHYT_RS19730
L-ribulose-5-phosphate 4-epimerase (EC 5.1.3.4) No genes
Possible GPH family transporter (TC 2.A.2) for arabinosides No genes
Predicted L-arabinose ABC transport system, ATP-binding protein No genes
Predicted L-arabinose ABC transport system, periplasmic arabinose-binding protein No genes
Predicted L-arabinose ABC transport system, permease protein 1 No genes
Predicted L-arabinose ABC transport system, permease protein 2 No genes
Predicted L-arabinose isomerase (EC 5.3.1.4) No genes
Predicted arabinose ABC transporter, permease protein 1 No genes
Predicted arabinose ABC transporter, permease protein 2 No genes
Predicted arabinose ABC transporter, substrate binding protein No genes
Predicted glycerol-1-phosphate dehydrogenase, arabinose operon No genes
Protein AraJ precursor No genes
Putative oxidoreductase in arabinose utilization cluster BPHYT_RS16920
Ribulokinase (EC 2.7.1.16) No genes
Transcriptional regulator of the arabinose operon in Shewanella, GntR family No genes
Transcriptional repressor of arabinoside utilization operon, GntR family No genes
alternative Ribulokinase (EC 2.7.1.16) No genes

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