SEED Subsystem: Isoleucine degradation in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name  
3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) BPHYT_RS03225
  BPHYT_RS06760
  BPHYT_RS09560
  BPHYT_RS13545
  BPHYT_RS34155
3-ketoacyl-CoA thiolase (EC 2.3.1.16) BPHYT_RS02230
  BPHYT_RS09565
3-ketoacyl-CoA thiolase [isoleucine degradation] (EC 2.3.1.16) No genes
Acyl-CoA dehydrogenase, short-chain specific (EC 1.3.99.2) BPHYT_RS03000
  BPHYT_RS08510
  BPHYT_RS20780
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) No genes
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4) No genes
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4) No genes
Branched-chain amino acid aminotransferase (EC 2.6.1.42) BPHYT_RS16285
Butyrate kinase (EC 2.7.2.7) No genes
Butyryl-CoA dehydrogenase (EC 1.3.99.2) BPHYT_RS00670
  BPHYT_RS02220
  BPHYT_RS08290
  BPHYT_RS20325
  BPHYT_RS25370
  BPHYT_RS25400
  BPHYT_RS28040
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168) No genes
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4) No genes
Enoyl-CoA hydratase (EC 4.2.1.17) BPHYT_RS02345
  BPHYT_RS03225
  BPHYT_RS03235
  BPHYT_RS03825
  BPHYT_RS08375
  BPHYT_RS08630
  BPHYT_RS09560
  BPHYT_RS10815
  BPHYT_RS11780
  BPHYT_RS13545
  BPHYT_RS14830
  BPHYT_RS25360
  BPHYT_RS25695
  BPHYT_RS27105
  BPHYT_RS27895
  BPHYT_RS28620
  BPHYT_RS35465
Enoyl-CoA hydratase [isoleucine degradation] (EC 4.2.1.17) BPHYT_RS28020
Lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.-) No genes
Predicted transcriptional regulator of leucine degradation pathway, MerR family No genes
Probable acyl-CoA dehydrogenase (EC 1.3.99.3) BPHYT_RS32685
Transcriptional regulator BkdR of isoleucine and valine catabolism operon BPHYT_RS19770
phosphotransbutyrylase (EC 2.3.1.19) No genes

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