SEED Subsystem: Glycine and Serine Utilization in Burkholderia phytofirmans PsJN

Experiments:

Role Gene Name  
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) BPHYT_RS34655
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) BPHYT_RS19320
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) BPHYT_RS01425
  BPHYT_RS02135
  BPHYT_RS07305
  BPHYT_RS20865
  BPHYT_RS20960
  BPHYT_RS24525
  BPHYT_RS27900
  BPHYT_RS30215
  BPHYT_RS30460
  BPHYT_RS31465
  BPHYT_RS31685
  BPHYT_RS31960
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine dehydratase transcriptional activator BPHYT_RS11810
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) BPHYT_RS09440
Glycine cleavage system H protein BPHYT_RS19325
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) BPHYT_RS19330
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) BPHYT_RS19340
  BPHYT_RS25100
L-serine dehydratase, beta subunit (EC 4.3.1.17) BPHYT_RS19340
  BPHYT_RS25100
Monoamine oxidase (1.4.3.4) BPHYT_RS09910
Phosphoserine aminotransferase (EC 2.6.1.52) BPHYT_RS14915
Phosphoserine phosphatase (EC 3.1.3.3) BPHYT_RS02470
  BPHYT_RS03625
  BPHYT_RS09200
Serine hydroxymethyltransferase (EC 2.1.2.1) BPHYT_RS01260
  BPHYT_RS03725
  BPHYT_RS25180
Serine transporter No genes
Seryl-tRNA synthetase (EC 6.1.1.11) BPHYT_RS05105
Threonine dehydratase, catabolic (EC 4.3.1.19) BPHYT_RS15425

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