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SEED Subsystem: Flagellum in
Burkholderia phytofirmans PsJN
Experiments:
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Role
Gene
Name
Flagellar L-ring protein FlgH
BPHYT
_RS17815
BPHYT
_RS18865
Flagellar M-ring protein FliF
BPHYT
_RS18775
Flagellar P-ring protein FlgI
BPHYT
_RS18860
Flagellar assembly protein FliH
BPHYT
_RS18785
Flagellar basal-body P-ring formation protein FlgA
BPHYT
_RS18900
Flagellar basal-body rod modification protein FlgD
BPHYT
_RS18885
Flagellar basal-body rod protein FlgB
BPHYT
_RS18895
Flagellar basal-body rod protein FlgC
BPHYT
_RS18890
Flagellar basal-body rod protein FlgF
BPHYT
_RS18875
Flagellar basal-body rod protein FlgG
BPHYT
_RS18870
Flagellar biosynthesis protein FlgN
BPHYT
_RS18910
Flagellar biosynthesis protein FlhA
BPHYT
_RS18940
BPHYT
_RS25875
Flagellar biosynthesis protein FlhB
BPHYT
_RS18750
BPHYT
_RS18945
BPHYT
_RS25880
Flagellar biosynthesis protein FlhF
BPHYT
_RS18935
Flagellar biosynthesis protein FliC
BPHYT
_RS19085
Flagellar biosynthesis protein FliL
BPHYT
_RS18805
Flagellar biosynthesis protein FliO
No genes
Flagellar biosynthesis protein FliP
BPHYT
_RS18825
Flagellar biosynthesis protein FliQ
BPHYT
_RS18820
BPHYT
_RS18830
Flagellar biosynthesis protein FliR
BPHYT
_RS18835
BPHYT
_RS25885
Flagellar biosynthesis protein FliS
BPHYT
_RS18765
Flagellar biosynthesis protein FliT
BPHYT
_RS18760
Flagellar biosynthesis protein FliZ
No genes
Flagellar hook protein FlgE
BPHYT
_RS11995
BPHYT
_RS18880
Flagellar hook-associated protein 3
No genes
Flagellar hook-associated protein FlgK
BPHYT
_RS18845
Flagellar hook-associated protein FlgL
BPHYT
_RS18840
Flagellar hook-associated protein FliD
BPHYT
_RS05055
BPHYT
_RS19090
Flagellar hook-basal body complex protein FliE
BPHYT
_RS18770
Flagellar hook-length control protein FliK
BPHYT
_RS09000
BPHYT
_RS18800
Flagellar motor rotation protein MotA
BPHYT
_RS19015
BPHYT
_RS22835
BPHYT
_RS29670
Flagellar motor rotation protein MotB
BPHYT
_RS19010
BPHYT
_RS22840
BPHYT
_RS29675
Flagellar motor switch protein FliG
BPHYT
_RS18780
Flagellar motor switch protein FliM
BPHYT
_RS18810
Flagellar motor switch protein FliN
BPHYT
_RS18815
Flagellar protein FlbB
No genes
Flagellar protein FlbD
No genes
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-)
BPHYT
_RS18855
Flagellar protein FlhE
No genes
Flagellar protein FliJ
BPHYT
_RS18795
Flagellar regulatory protein FleQ
No genes
Flagellar sensor histidine kinase FleS
No genes
Flagellar synthesis regulator FleN
BPHYT
_RS18930
Flagellar trans-acting factor FliX
No genes
Flagellar transcriptional activator FlhC
BPHYT
_RS19020
BPHYT
_RS22555
Flagellar transcriptional activator FlhD
BPHYT
_RS19025
BPHYT
_RS22560
Flagellin protein FlaA
No genes
Flagellin protein FlaB
No genes
Flagellin protein FlaC
No genes
Flagellin protein FlaD
No genes
Flagellin protein FlaE
No genes
Flagellin protein FlaF
No genes
Flagellin protein FlaG
No genes
Flagellum-specific ATP synthase FliI
BPHYT
_RS18790
BPHYT
_RS25870
Negative regulator of flagellin synthesis
BPHYT
_RS18905
Negative regulator of flagellin synthesis FlgM
No genes
RNA polymerase sigma factor RpoD
BPHYT
_RS32590
BPHYT
_RS33535
RNA polymerase sigma factor for flagellar operon
BPHYT
_RS18925
RNA polymerase sigma-54 factor RpoN
BPHYT
_RS02905
BPHYT
_RS08240
BPHYT
_RS24740
BPHYT
_RS27005
Or select organism:
Acidovorax sp. GW101-3H11
Acinetobacter baumannii LAC-4
Acinetobacter radioresistens SK82
Agrobacterium fabrum C58
Alteromonas macleodii MIT1002
Azospirillum brasilense Sp245
Azospirillum sp. SherDot2
Bacteroides ovatus ATCC 8483
Bacteroides stercoris CC31F
Bacteroides thetaiotaomicron VPI-5482
Bifidobacterium breve UCC2003
Bosea sp. OAE506
Brevundimonas sp. GW460-12-10-14-LB2
Burkholderia phytofirmans PsJN
Castellaniella sp019104865 MT123
Caulobacter crescentus NA1000
Caulobacter crescentus NA1000 Δfur
Cellulophaga baltica 18
Cupriavidus basilensis FW507-4G11
Dechlorosoma suillum PS
Desulfovibrio vulgaris Hildenborough JW710
Desulfovibrio vulgaris Miyazaki F
Dickeya dadantii 3937
Dickeya dianthicola 67-19
Dickeya dianthicola ME23
Dinoroseobacter shibae DFL-12
Dyella japonica UNC79MFTsu3.2
Echinicola vietnamensis KMM 6221, DSM 17526
Enterobacter asburiae PDN3
Enterobacter sp. TBS_079
Erwinia amylovora T8
Erwinia tracheiphila HP pepo 2.2
Erwinia tracheiphila SCR3
Escherichia coli BL21
Escherichia coli BW25113
Escherichia coli ECOR27
Escherichia coli ECOR38
Escherichia coli ECRC100
Escherichia coli ECRC101
Escherichia coli ECRC102
Escherichia coli ECRC62
Escherichia coli ECRC98
Escherichia coli ECRC99
Escherichia coli HS(pFamp)R (ATCC 700891)
Escherichia coli Nissle 1917
Escherichia fergusonii Becca
Fusobacterium nucleatum SB010
Herbaspirillum seropedicae SmR1
Hydrogenophaga sp. GW460-11-11-14-LB1
Kangiella aquimarina DSM 16071
Klebsiella michiganensis M5al
Klebsiella pneumoniae MKP103
Lysobacter sp. OAE881
Magnetospirillum magneticum AMB-1
Marinobacter adhaerens HP15
Methanococcus maripaludis JJ
Methanococcus maripaludis S2
Methylophilus sp. DMC18
Mucilaginibacter yixingensis YX-36 DSM 26809
Mycobacterium tuberculosis H37Rv
Pantoea agglomerans CFBP13505 P0401
Pantoea sp. MT58
Parabacteroides merdae CL09T00C40
Paraburkholderia bryophila 376MFSha3.1
Paraburkholderia graminis OAS925
Paraburkholderia sabiae LMG 24235
Pectobacterium carotovorum WPP14
Pedobacter sp. GW460-11-11-14-LB5
Phaeobacter inhibens DSM 17395
Phocaeicola dorei CL03T12C01
Phocaeicola vulgatus CL09T03C04
Pontibacter actiniarum KMM 6156, DSM 19842
Pseudomonas aeruginosa PA14
Pseudomonas fluorescens FW300-N1B4
Pseudomonas fluorescens FW300-N2C3
Pseudomonas fluorescens FW300-N2E2
Pseudomonas fluorescens FW300-N2E3
Pseudomonas fluorescens GW456-L13
Pseudomonas fluorescens SBW25
Pseudomonas fluorescens SBW25-INTG
Pseudomonas lactucae CFBP13502
Pseudomonas putida KT2440
Pseudomonas simiae WCS417
Pseudomonas sp. BP01
Pseudomonas sp. DMC3
Pseudomonas sp. RS175
Pseudomonas sp. S08-1
Pseudomonas sp. SVBP6
Pseudomonas stutzeri RCH2
Pseudomonas syringae pv. syringae B728a
Pseudomonas syringae pv. syringae B728a ΔmexB
Rahnella sp. WP5
Ralstonia solanacearum GMI1000
Ralstonia solanacearum IBSBF1503
Ralstonia solanacearum PSI07
Ralstonia solanacearum UW163
Ralstonia sp. UNC404CL21Col
Rhizobium sp. OAE497
Rhodanobacter denitrificans FW104-10B01
Rhodanobacter denitrificans MT42
Rhodanobacter sp. FW510-T8
Rhodanobacter sp000427505 FW510-R12
Rhodopseudomonas palustris CGA009
Rhodospirillum rubrum S1H
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868
Serratia liquefaciens MT49
Shewanella amazonensis SB2B
Shewanella loihica PV-4
Shewanella oneidensis MR-1
Shewanella sp. ANA-3
Sinorhizobium meliloti 1021
Sphingobium sp. HT1-2
Sphingomonas koreensis DSMZ 15582
Synechococcus elongatus PCC 7942
Synechocystis sp000284455 PCC 6803
Variovorax sp. OAS795
Variovorax sp. SCN45
Vibrio cholerae E7946 ATCC 55056
Xanthobacter sp. DMC5
Xanthomonas campestris pv. campestris strain 8004
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