SEED Subsystem: TCA Cycle in Shewanella sp. ANA-3

Experiments:

Role Gene Name  
2-oxoglutarate dehydrogenase E1 component (EC 1.2.4.2) Shewana3_1710 sucA
Aconitate hydratase (EC 4.2.1.3) No genes
Aconitate hydratase 2 (EC 4.2.1.3) No genes
Aconitate hydratase X, predicted No genes
Aconitate hydratase large subunit (EC 4.2.1.3) No genes
Aconitate hydratase small subunit (EC 4.2.1.3) No genes
Archaeal succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) No genes
Archaeal succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) No genes
Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6) No genes
Citrate synthase (si) (EC 2.3.3.1) Shewana3_1705 gltA
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) Shewana3_4311
Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) No genes
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) No genes
Dihydrolipoamide succinyltransferase component (E2) of 2-oxoglutarate dehydrogenase complex (EC 2.3.1.61) Shewana3_1711
Fumarate hydratase class I (EC 4.2.1.2) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) Shewana3_2302
Fumarate hydratase class II (EC 4.2.1.2) No genes
Isocitrate dehydrogenase [NADP] (EC 1.1.1.42) No genes
Isocitrate dehydrogenase [NAD] (EC 1.1.1.41) Shewana3_2890
Malate dehydrogenase (EC 1.1.1.37) Shewana3_3509
Malate:quinone oxidoreductase (EC 1.1.5.4) No genes
Putative Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Shewana3_0403
  Shewana3_1708 sdhA
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Shewana3_0404 frdB
  Shewana3_1709 sdhB
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Shewana3_1713
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Shewana3_1712 sucC
Transcriptional regulator of succinyl CoA synthetase operon No genes
hypothetical protein that often co-occurs with aconitase No genes

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Or view this subsystem at the SEED (slow)