SEED Subsystem: Photorespiration (oxidative C2 cycle) in Ralstonia sp. UNC404CL21Col

Experiments:

Role Gene Name Octanoic (C)  
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) ABZR87_RS00230 -0.2
  ABZR87_RS03895 -0.0
2-oxoglutarate/malate translocator No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) ABZR87_RS03925 +0.6
Catalase (EC 1.11.1.6) ABZR87_RS01240 +0.2
  ABZR87_RS21385 +0.0
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) ABZR87_RS01125 -0.1
D-glycerate 3-kinase (EC 2.7.1.31), plant type No genes
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Expressed protein possibly involved in photorespiration No genes
Glycerate kinase (EC 2.7.1.31) No genes
Glycine cleavage system H protein ABZR87_RS03930 -1.6
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) ABZR87_RS03935 +0.6
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE ABZR87_RS01145 -0.4
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF ABZR87_RS01150 -0.6
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD ABZR87_RS01135 -1.5
Glycolate oxidase (EC 1.1.3.15) No genes
Glycolate permease No genes
Glyoxylate carboligase (EC 4.1.1.47) ABZR87_RS03885 -0.3
Hydroxypyruvate reductase (EC 1.1.1.81) No genes
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) No genes
Malate synthase (EC 2.3.3.9) ABZR87_RS11625 -4.8
Malate synthase G (EC 2.3.3.9) No genes
Malyl-CoA lyase (EC 4.1.3.24) No genes
Phosphoglycolate phosphatase (EC 3.1.3.18) ABZR87_RS02135 -0.2
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) No genes
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) ABZR87_RS08955 N.D.
Serine--glyoxylate aminotransferase (EC 2.6.1.45) No genes

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