SEED Subsystem: Calvin-Benson cycle in Sinorhizobium meliloti 1021

Experiments:

Role Gene Name L-Lysine (C)  
⨯
Fructose-1,6-bisphosphatase, GlpX type (EC 3.1.3.11) No genes
Fructose-1,6-bisphosphatase, type I (EC 3.1.3.11) SM_b20202 -0.3
Fructose-1,6-bisphosphatase, type V, archaeal (EC 3.1.3.11) No genes
Fructose-bisphosphate aldolase class I (EC 4.1.2.13) SMc03983 -0.1
Fructose-bisphosphate aldolase class II (EC 4.1.2.13) SM_b20199 -0.7
  SM_b21192 +0.3
NAD(P)-dependent glyceraldehyde 3-phosphate dehydrogenase archaeal (EC 1.2.1.59) No genes
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) SMc03979 -5.1
NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.13) SMc03979 -5.1
Phosphoglycerate kinase (EC 2.7.2.3) SMc03981 -6.1
Phosphoribulokinase (EC 2.7.1.19) SM_b20201 -0.1
Phosphoribulokinase (EC 2.7.1.19) homolog, function unknown No genes
Protein CP12, regulation of Calvin cycle via association/dissociation of PRK/CP12/GAPDH complex No genes
Ribose 1,5-bisphosphate or 5-ribose-1,2-cyclic phosphate dehydrogenase No genes
Ribose 5-phosphate isomerase A (EC 5.3.1.6) SMc00152 N.D.
Ribose 5-phosphate isomerase B (EC 5.3.1.6) SM_b20371 +0.1
  SMc01613 -0.4
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) SM_b20198 -3.3
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) SM_b20197 -3.7
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
Ribulose-phosphate 3-epimerase (EC 5.1.3.1) SM_b20195 -0.2
  SMc00511 -0.3
Sedoheptulose-1,7-bisphosphatase (EC 3.1.3.37) No genes
Transketolase (EC 2.2.1.1) SM_b20200 -0.9
  SMc02342 -0.1
  SMc03978 -1.9
Transketolase, C-terminal section (EC 2.2.1.1) SMc00269 +0.2
Transketolase, N-terminal section (EC 2.2.1.1) SMc00270 -0.1
Triosephosphate isomerase (EC 5.3.1.1) SMc01023 +0.1
  SMc01614 -0.6

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