SEED Subsystem: RNA processing and degradation, bacterial in Pantoea sp. MT58

Experiments:

Role Gene Name Survival; Treatment=UGA synthetic gw pH7.4 with 1 mM Glucose and 5 mM NaH2PO4; TreatmentDuration=24hrs; Outgrowth=LBkan50  
⨯
3'-to-5' exoribonuclease RNase R IAI47_02625 -0.5
3'-to-5' oligoribonuclease (orn) IAI47_02540 N.D.
3'-to-5' oligoribonuclease B, Bacillus type No genes
Cytoplasmic axial filament protein CafA and Ribonuclease G (EC 3.1.4.-) IAI47_02455 +0.4
Exoribonuclease II (EC 3.1.13.1) IAI47_09320 -1.5
FIG146085: 3'-to-5' oligoribonuclease A, Bacillus type No genes
Ribonuclease E (EC 3.1.26.12) IAI47_12110 +0.3
Ribonuclease E inhibitor RraA IAI47_00840 +0.1
Ribonuclease E inhibitor RraB IAI47_16825 -0.0
Ribonuclease I precursor (EC 3.1.27.6) No genes
Ribonuclease III (EC 3.1.26.3) IAI47_04880 N.D.

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