SEED Subsystem: Formate hydrogenase in Klebsiella michiganensis M5al

Experiments:

Role Gene Name RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 1x  
Formate dehydrogenase -O, gamma subunit (EC 1.2.1.2) No genes
Formate dehydrogenase N alpha subunit (EC 1.2.1.2) No genes
Formate dehydrogenase N beta subunit (EC 1.2.1.2) BWI76_RS13745 +0.1
Formate dehydrogenase N gamma subunit (EC 1.2.1.2) BWI76_RS13750 -0.1
Formate dehydrogenase O alpha subunit (EC 1.2.1.2) No genes
Formate dehydrogenase O beta subunit (EC 1.2.1.2) BWI76_RS00460 N.D.
  BWI76_RS19150 N.D.
Formate dehydrogenase O gamma subunit (EC 1.2.1.2) BWI76_RS00455 N.D.
  BWI76_RS19145 -0.2
Formate dehydrogenase O putative subunit No genes
Formate dehydrogenase chain D (EC 1.2.1.2) BWI76_RS00475 -0.2
Formate dehydrogenase putative subunit (EC 1.2.1.2) No genes
Formate dehydrogenase related protein No genes
Formate dehydrogenase-O, iron-sulfur subunit (EC 1.2.1.2) No genes
Formate dehydrogenase-O, major subunit (EC 1.2.1.2) No genes
Formate hydrogenlyase hypothetical subunit No genes
Formate hydrogenlyase regulatory protein HycA BWI76_RS22340 -0.2
Formate hydrogenlyase subunit 2 BWI76_RS22335 +0.4
Formate hydrogenlyase subunit 3 BWI76_RS22330 +0.2
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit No genes
Formate hydrogenlyase subunit 4 BWI76_RS22325 +0.1
Formate hydrogenlyase subunit 5 BWI76_RS22320 -0.1
Formate hydrogenlyase subunit 6 No genes
Formate hydrogenlyase subunit 7 BWI76_RS22310 -0.0
Formate hydrogenlyase transcriptional activator BWI76_RS21990 -2.2
  BWI76_RS22370 -0.0
Hydrogenase-4 component A (EC 1.-.-.-) No genes
Hydrogenase-4 component B (EC 1.-.-.-) No genes
Hydrogenase-4 component C (EC 1.-.-.-) No genes
Hydrogenase-4 component D (EC 1.-.-.-) No genes
Hydrogenase-4 component E (EC 1.-.-.-) No genes
Hydrogenase-4 component F (EC 1.-.-.-) No genes
Hydrogenase-4 component G (EC 1.-.-.-) No genes
Hydrogenase-4 component H (EC 1.-.-.-) No genes
Hydrogenase-4 component I (EC 1.-.-.-) No genes
Hydrogenase-4 transcriptional activator No genes
Hypothetical protein YrhD No genes
Hypothetical protein probably related to Formate dehydrogenase function No genes
NAD-dependent formate dehydrogenase (EC 1.2.1.2) No genes
NAD-dependent formate dehydrogenase alpha subunit No genes
NAD-dependent formate dehydrogenase beta subunit No genes
NAD-dependent formate dehydrogenase delta subunit No genes
NAD-dependent formate dehydrogenase gamma subunit No genes
Putative formate dehydrogenase iron-sulfur subunit (EC 1.2.1.2) No genes
Putative formate dehydrogenase oxidoreductase protein BWI76_RS13875 -0.0
Putative formate dehydrogenase, cytochrome B subunit (EC 1.2.1.2) No genes
Putative formate dehydrogenase-specific chaperone No genes
formate dehydrogenase formation protein FdhE BWI76_RS00450 +0.1
hydrogenase, HycC subunit, putative No genes
hydrogenase, group 4, HycE subunit, putative No genes
hydrogenase, group 4, HycG subunit, putative No genes
tungsten-containing formate dehydrogenase alpha subunit No genes
tungsten-containing formate dehydrogenase beta subunit No genes

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