SEED Subsystem: Bacterial Chemotaxis in Pseudomonas syringae pv. syringae B728a

Experiments:

Role Gene Name library passed through aphids in food, 24 hours  
Aerotaxis sensor receptor protein No genes
Chemotaxis protein CheC -- inhibitor of MCP methylation Psyr_0886 -0.2
Chemotaxis protein CheD Psyr_0782 -0.1
Chemotaxis protein CheV (EC 2.7.3.-) Psyr_1139 +0.1
  Psyr_3297 -0.4
  Psyr_3486 -0.2
Chemotaxis protein CheX No genes
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) Psyr_0783 +0.1
  Psyr_2446 -0.7
  Psyr_3485 -1.2
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY Psyr_0788 +0.1
  Psyr_2448 +0.1
  Psyr_3436 -1.1
  Psyr_3496 +0.2
Chemotaxis response - phosphatase CheZ Psyr_3435 -1.2
Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) Psyr_0781 -0.2
  Psyr_3433 -1.3
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) Psyr_0223 -0.1
  Psyr_4234 +0.0
  Psyr_4235 +0.1
  Psyr_4236 +0.0
  Psyr_4238 +0.1
Flagellar motor switch protein FliG Psyr_3456 -1.5
Flagellar motor switch protein FliM Psyr_3447 -1.4
Flagellar motor switch protein FliN Psyr_3446 -1.7
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) No genes
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE Psyr_0762 -0.2
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) Psyr_0379 +0.0
  Psyr_0380 -0.0
  Psyr_0785 +0.0
  Psyr_0860 -0.1
  Psyr_0868 -0.0
  Psyr_0905 +0.1
  Psyr_1150 -0.0
  Psyr_1303 -0.1
  Psyr_1491 +0.1
  Psyr_1539 -0.1
  Psyr_1789 +0.0
  Psyr_2109 +0.0
  Psyr_2237 -0.2
  Psyr_2315 -0.0
  Psyr_2356 +0.2
  Psyr_2634 +0.0
  Psyr_2878 +0.3
  Psyr_3114 +0.1
  Psyr_3348 -0.1
  Psyr_3351 +0.2
  Psyr_4218 +0.1
  Psyr_4706 -0.1
  Psyr_5092 -0.1
  Psyr_5093 -0.0
Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) No genes
Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) No genes
Methyl-accepting chemotaxis protein IV (dipeptide chemoreceptor protein) No genes
Positive regulator of CheA protein activity (CheW) Psyr_0784 +0.3
  Psyr_2215 +0.0
  Psyr_3428 -1.4
Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) Psyr_2238 -0.2
Signal transduction histidine kinase CheA (EC 2.7.3.-) Psyr_0786 -0.1
  Psyr_3434 -1.1

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