SEED Subsystem: Urea decomposition in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name Urea (N)  
⨯
Allophanate hydrolase (EC 3.5.1.54) Pf6N2E2_2782 -0.4
Eukaryotic-type low-affinity urea transporter Pf6N2E2_5834 -0.3
HupE-UreJ family metal transporter Pf6N2E2_3573 -6.0
Nickel transporter UreH No genes
Partial urea carboxylase (EC 6.3.4.6) No genes
Partial urea carboxylase 2 (EC 6.3.4.6) No genes
Urea ABC transporter, ATPase protein UrtD Pf6N2E2_186 +0.1
  Pf6N2E2_3550 +1.2
Urea ABC transporter, ATPase protein UrtE Pf6N2E2_187 -0.1
  Pf6N2E2_3551 -0.3
Urea ABC transporter, permease protein UrtB Pf6N2E2_184 -0.0
  Pf6N2E2_3548 +0.4
Urea ABC transporter, permease protein UrtC Pf6N2E2_185 +0.4
  Pf6N2E2_3549 +0.6
Urea ABC transporter, urea binding protein Pf6N2E2_183 +0.3
Urea carboxylase (EC 6.3.4.6) Pf6N2E2_2781 -0.3
Urea carboxylase-related ABC transporter, ATPase protein Pf6N2E2_2777 -0.1
Urea carboxylase-related ABC transporter, periplasmic substrate-binding protein Pf6N2E2_2775 -0.5
Urea carboxylase-related ABC transporter, permease protein Pf6N2E2_2776 -0.4
Urea carboxylase-related amino acid permease No genes
Urea carboxylase-related aminomethyltransferase (EC 2.1.2.10) Pf6N2E2_2778 -0.4
  Pf6N2E2_2779 +0.1
Urea channel UreI No genes
Urease accessory protein UreD Pf6N2E2_3552 -4.6
Urease accessory protein UreE Pf6N2E2_3570 -2.9
Urease accessory protein UreF Pf6N2E2_3571 -4.6
Urease accessory protein UreG Pf6N2E2_3572 -3.7
Urease alpha subunit (EC 3.5.1.5) Pf6N2E2_3556 -4.2
Urease beta subunit (EC 3.5.1.5) No genes
Urease gamma subunit (EC 3.5.1.5) Pf6N2E2_3553 -4.6

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