| Role | Gene | Name | 2-Deoxyadenosine 5-monophosphate 5 mM (C) | |
|---|
| | | ⨯ | |
| Alcohol dehydrogenase GbsB (type III ), essential for the utilization of choline (EC 1.1.1.1) | No genes | | | |
| Betaine aldehyde dehydrogenase (EC 1.2.1.8) | BPHYT_RS25160 | | +0.7 | |
| Choline ABC transport system, ATP-binding protein OpuBA | No genes | | | |
| Choline ABC transport system, choline-binding protein OpuBC | No genes | | | |
| Choline ABC transport system, permease protein OpuBB | No genes | | | |
| Choline ABC transport system, permease protein OpuBD | No genes | | | |
| Choline binding protein A | No genes | | | |
| Choline binding protein D | No genes | | | |
| Choline dehydrogenase (EC 1.1.99.1) | BPHYT_RS09890 | | +0.6 | |
| | BPHYT_RS10810 | | -0.2 | |
| | BPHYT_RS18735 | | -0.1 | |
| | BPHYT_RS19495 | | +0.4 | |
| | BPHYT_RS20800 | | -0.2 | |
| | BPHYT_RS21745 | | +3.1 | |
| | BPHYT_RS25155 | | +0.1 | |
| | BPHYT_RS30515 | | -0.2 | |
| Choline-sulfatase (EC 3.1.6.6) | BPHYT_RS25240 | | -0.6 | |
| | BPHYT_RS32895 | | -0.3 | |
| GbcA Glycine betaine demethylase subunit A | BPHYT_RS33590 | | +0.6 | |
| GbcB Glycine betaine demethylase subunit B | No genes | | | |
| Glycine betaine ABC transport system permease protein | No genes | | | |
| Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC 3.6.3.32) | No genes | | | |
| Glycine betaine ABC transport system, glycine betaine-binding protein OpuAC | No genes | | | |
| Glycine betaine ABC transport system, permease protein OpuAB | No genes | | | |
| Glycine betaine ABC transport system, permease/glycine betaine-binding protein OpuABC | No genes | | | |
| Glycine betaine transporter OpuD | No genes | | | |
| Glycine betaine/L-proline ABC transporter, glycine betaine/L-proline- binding/permease protein | No genes | | | |
| HTH-type transcriptional regulator BetI | BPHYT_RS25165 | | +0.6 | |
| High-affinity choline uptake protein BetT | No genes | | | |
| L-proline glycine betaine ABC transport system permease protein ProV (TC 3.A.1.12.1) | BPHYT_RS25065 | | +0.8 | |
| L-proline glycine betaine ABC transport system permease protein ProW (TC 3.A.1.12.1) | BPHYT_RS25070 | | -0.1 | |
| L-proline glycine betaine binding ABC transporter protein ProX (TC 3.A.1.12.1) | BPHYT_RS22390 | | +0.3 | |
| | BPHYT_RS25080 | | -0.5 | |
| | BPHYT_RS25225 | | N.D. | |
| | BPHYT_RS25245 | | N.D. | |
| Osmotically activated L-carnitine/choline ABC transporter, ATP-binding protein OpuCA | No genes | | | |
| Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCB | No genes | | | |
| Osmotically activated L-carnitine/choline ABC transporter, permease protein OpuCD | No genes | | | |
| Osmotically activated L-carnitine/choline ABC transporter, substrate-binding protein OpuCC | No genes | | | |
| Sarcosine oxidase alpha subunit (EC 1.5.3.1) | BPHYT_RS09375 | | -0.0 | |
| | BPHYT_RS25115 | | +0.2 | |
| Sarcosine oxidase beta subunit (EC 1.5.3.1) | BPHYT_RS09370 | | +0.0 | |
| | BPHYT_RS21990 | | -0.3 | |
| | BPHYT_RS24345 | | N.D. | |
| | BPHYT_RS25105 | | -0.1 | |
| | BPHYT_RS32315 | | N.D. | |
| | BPHYT_RS32645 | | +0.1 | |
| Sarcosine oxidase delta subunit (EC 1.5.3.1) | BPHYT_RS25110 | | +0.2 | |
| Sarcosine oxidase gamma subunit (EC 1.5.3.1) | BPHYT_RS25120 | | N.D. | |