SEED Subsystem: Bacterial Chemotaxis in Pantoea sp. MT58

Experiments:

Role Gene Name Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=12hrs; Outgrowth=LBkan50  
⨯
Aerotaxis sensor receptor protein IAI47_17690 -0.2
Chemotaxis protein CheC -- inhibitor of MCP methylation No genes
Chemotaxis protein CheD No genes
Chemotaxis protein CheV (EC 2.7.3.-) IAI47_15065 -0.0
Chemotaxis protein CheX No genes
Chemotaxis protein methyltransferase CheR (EC 2.1.1.80) IAI47_08325 -1.2
Chemotaxis regulator - transmits chemoreceptor signals to flagelllar motor components CheY IAI47_08335 -0.5
Chemotaxis response - phosphatase CheZ IAI47_08340 +1.4
  IAI47_20985 +0.2
Chemotaxis response regulator protein-glutamate methylesterase CheB (EC 3.1.1.61) IAI47_08330 +1.3
Dipeptide-binding ABC transporter, periplasmic substrate-binding component (TC 3.A.1.5.2) IAI47_09645 -0.1
  IAI47_10080 -0.1
  IAI47_11340 -0.2
  IAI47_16715 +0.0
  IAI47_18650 +0.1
Flagellar motor switch protein FliG IAI47_08025 +1.3
Flagellar motor switch protein FliM IAI47_07995 +1.6
Flagellar motor switch protein FliN IAI47_07990 +1.6
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) IAI47_06735 -0.2
  IAI47_19810 -0.0
Maltose/maltodextrin ABC transporter, substrate binding periplasmic protein MalE IAI47_20525 -0.1
  IAI47_20930 +0.1
Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) IAI47_02745 +0.0
  IAI47_07295 +0.1
  IAI47_07715 -0.1
  IAI47_07725 +0.0
  IAI47_08310 -0.1
  IAI47_08315 -0.2
  IAI47_08320 +0.2
  IAI47_09335 +0.1
  IAI47_09610 +0.3
  IAI47_10640 -0.2
  IAI47_15075 +0.1
  IAI47_18910 +0.1
  IAI47_19160 +0.0
  IAI47_19180 -0.1
  IAI47_19820 +0.1
  IAI47_20075 -0.0
  IAI47_21185 +0.0
  IAI47_21395 +0.2
  IAI47_21400 +0.2
  IAI47_21455 +0.1
  IAI47_21815 +0.3
Methyl-accepting chemotaxis protein II (aspartate chemoreceptor protein) No genes
Methyl-accepting chemotaxis protein III (ribose and galactose chemoreceptor protein) IAI47_07960 -0.2
  IAI47_13345 +0.3
Methyl-accepting chemotaxis protein IV (dipeptide chemoreceptor protein) No genes
Positive regulator of CheA protein activity (CheW) IAI47_08305 -1.2
Ribose ABC transporter, periplasmic ribose-binding protein RbsB (TC 3.A.1.2.1) IAI47_10010 +0.1
  IAI47_16750 +0.3
Signal transduction histidine kinase CheA (EC 2.7.3.-) IAI47_08300 -1.2
  IAI47_20280 +0.1

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