SEED Subsystem: Denitrification in Pseudomonas fluorescens FW300-N2E3

Experiments:

Role Gene Name N1B4wt with N2E3m denitrifying replicate C  
⨯
Copper-containing nitrite reductase (EC 1.7.2.1) No genes
Cytochrome cd1 nitrite reductase (EC:1.7.2.1) AO353_21970 -0.6
Nitric oxide -responding transcriptional regulator Dnr (Crp/Fnr family) AO353_22005 -1.6
  AO353_22070 -0.1
Nitric oxide -responding transcriptional regulator NnrR (Crp/Fnr family) No genes
Nitric oxide reductase activation protein NorD AO353_22000 -1.8
Nitric oxide reductase activation protein NorE AO353_21980 +0.3
Nitric oxide reductase activation protein NorQ AO353_21975 -1.0
Nitric-oxide reductase (EC 1.7.99.7), quinol-dependent No genes
Nitric-oxide reductase subunit B (EC 1.7.99.7) AO353_21995 -0.7
Nitric-oxide reductase subunit C (EC 1.7.99.7) AO353_21990 -0.3
Nitrite reductase accessory protein NirV No genes
Nitrous oxide reductase maturation periplasmic protein NosX No genes
Nitrous oxide reductase maturation protein NosD No genes
Nitrous oxide reductase maturation protein NosF (ATPase) No genes
Nitrous oxide reductase maturation protein NosR No genes
Nitrous oxide reductase maturation protein, outer-membrane lipoprotein NosL No genes
Nitrous oxide reductase maturation transmembrane protein NosY No genes
Nitrous-oxide reductase (EC 1.7.99.6) No genes
NnrS protein involved in response to NO AO353_22015 +1.5
NnrT family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) No genes
NnrU family protein, required for expression of nitric oxide and nitrite reductases (Nir and Nor) No genes

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