SEED Subsystem: Leucine Degradation and HMG-CoA Metabolism in Pseudomonas fluorescens SBW25-INTG

Role	Gene	Name	Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs
Acetoacetyl-CoA synthetase (EC 6.2.1.16)	PFLU_RS12835		-0.2
	PFLU_RS21255		-0.0
Acetoacetyl-CoA synthetase [leucine] (EC 6.2.1.16)	PFLU_RS18960		-0.0
Biotin carboxyl carrier protein of methylcrotonyl-CoA carboxylase	No genes
Biotin carboxylase of methylcrotonyl-CoA carboxylase (EC 6.3.4.14)	No genes
Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12)	No genes
Branched-chain alpha-keto acid dehydrogenase, E1 component, alpha subunit (EC 1.2.4.4)	PFLU_RS19355		-0.4
Branched-chain alpha-keto acid dehydrogenase, E1 component, beta subunit (EC 1.2.4.4)	PFLU_RS19360		-0.3
Branched-chain amino acid aminotransferase (EC 2.6.1.42)	PFLU_RS19375		-1.5
Dihydrolipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex (EC 2.3.1.168)	PFLU_RS19365		-0.2
Dihydrolipoamide dehydrogenase (EC 1.8.1.4)	No genes
Dihydrolipoamide dehydrogenase of branched-chain alpha-keto acid dehydrogenase (EC 1.8.1.4)	PFLU_RS19370		-0.3
Hydroxymethylglutaryl-CoA lyase (EC 4.1.3.4)	PFLU_RS06990		-0.2
	PFLU_RS18955		-1.5
Hydroxymethylglutaryl-CoA reductase (EC 1.1.1.34)	No genes
Hydroxymethylglutaryl-CoA synthase (EC 2.3.3.10)	No genes
Isovaleryl-CoA dehydrogenase (EC 1.3.99.10)	No genes
Leucine dehydrogenase (EC 1.4.1.9)	PFLU_RS05110		+0.0
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4)	PFLU_RS18980		-0.5
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4)	PFLU_RS18970		-0.4
Methylglutaconyl-CoA hydratase (EC 4.2.1.18)	PFLU_RS18975		-0.7
Predicted transcriptional regulator of leucine degradation pathway, MerR family	No genes
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5)	PFLU_RS10585		-0.6
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5)	PFLU_RS10580		+0.1