SEED Subsystem: Alginate metabolism in Pseudomonas syringae pv. syringae B728a

Experiments:

Role Gene Name apoplastic; Lima bean  
⨯
Alginate biosynthesis protein Alg8 Psyr_1062 -1.5
Alginate biosynthesis protein AlgX Psyr_1057 -1.1
Alginate biosynthesis transcriptional activator Psyr_1528 -0.7
  Psyr_3551 N.D.
Alginate lyase (EC 4.2.2.3) No genes
Alginate lyase precursor (EC 4.2.2.3) Psyr_1056 -2.7
GDP-mannose 6-dehydrogenase (EC 1.1.1.132) Psyr_1063 -1.1
Hexuronate transporter Psyr_0325 +0.1
  Psyr_2129 -0.3
Mannose-1-phosphate guanylyltransferase (GDP) (EC 2.7.7.22) No genes
Mannose-6-phosphate isomerase (EC 5.3.1.8) Psyr_0603 -0.3
Pectin degradation protein KdgF No genes
Phosphomannomutase (EC 5.4.2.8) Psyr_0219 -3.9
Poly(beta-D-mannuronate) C5 epimerase precursor (EC 5.1.3.-) No genes
Probable poly(beta-D-mannuronate) O-acetylase (EC 2.3.1.-) Psyr_1055 -1.5
RNA polymerase sigma-H factor AlgT Psyr_3958 -3.8
alginate biosynthesis protein AlgJ No genes
alginate o-acetyltransferase AlgF No genes
outer membrane protein AlgE No genes
poly(beta-D-mannuronate) lyase (EC 4.2.2.3) No genes

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