SEED Subsystem: DNA-replication in Pantoea sp. MT58

Experiments:

Role Gene Name Survival; Treatment=FW300 (pH7.4) with 1.0 mM Glucose; TreatmentDuration=0.5hrs; Outgrowth=LBkan50  
⨯
ATP-dependent DNA helicase RecG (EC 3.6.1.-) IAI47_00500 -1.0
ATP-dependent DNA helicase RecQ IAI47_18360 -0.2
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA IAI47_05195 +0.4
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) IAI47_08440 -0.4
DNA polymerase I (EC 2.7.7.7) IAI47_00430 -1.2
  IAI47_04040 -0.1
DNA polymerase II (EC 2.7.7.7) IAI47_16050 +0.1
DNA polymerase III alpha subunit (EC 2.7.7.7) IAI47_15455 N.D.
DNA polymerase III beta subunit (EC 2.7.7.7) IAI47_00010 N.D.
DNA polymerase III chi subunit (EC 2.7.7.7) IAI47_16800 N.D.
DNA polymerase III delta prime subunit (EC 2.7.7.7) IAI47_12040 N.D.
DNA polymerase III delta subunit (EC 2.7.7.7) IAI47_14005 N.D.
DNA polymerase III epsilon subunit (EC 2.7.7.7) IAI47_15325 N.D.
DNA polymerase III psi subunit (EC 2.7.7.7) IAI47_16370 N.D.
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) IAI47_14475 N.D.
DNA polymerase III theta subunit (EC 2.7.7.7) IAI47_05705 +0.3
  IAI47_08525 -0.2
DNA primase (EC 2.7.7.-) IAI47_03055 N.D.
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN IAI47_04810 -0.1
DNA replication protein DnaC IAI47_00165 N.D.
DNA replication terminus site-binding protein IAI47_10330 +1.7
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) IAI47_03970 -0.6
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) IAI47_03965 N.D.
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) IAI47_03955 N.D.
Helicase PriA essential for oriC/DnaA-independent DNA replication IAI47_00865 N.D.
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA IAI47_08445 -0.1
Holliday junction DNA helicase RuvB IAI47_08450 -1.4
Primosomal protein I IAI47_00160 N.D.
Primosomal replication protein N IAI47_02665 N.D.
Primosomal replication protein N prime prime IAI47_14490 +0.4
RecA protein IAI47_04300 -1.9
Recombination protein RecR IAI47_14465 -0.2
Replicative DNA helicase (EC 3.6.1.-) IAI47_17850 N.D.
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) IAI47_03830 +0.2
Transcription-repair coupling factor IAI47_11975 -0.0

Or select organism:

Or view this subsystem at the SEED (slow)