SEED Subsystem: Heat shock dnaK gene cluster extended in Klebsiella michiganensis M5al

Experiments:

Role Gene Name Cobalt chloride 0.5 mM  
⨯
Chaperone protein DnaJ BWI76_RS04305 +2.3
Chaperone protein DnaK BWI76_RS04300 N.D.
DNA replication intiation control protein YabA No genes
FIG001341: Probable Fe(2+)-trafficking protein YggX BWI76_RS24160 N.D.
FIG009886: phosphoesterase No genes
Glutathione synthetase (EC 6.3.2.3) BWI76_RS24075 +1.1
Heat shock protein GrpE BWI76_RS21545 N.D.
Heat-inducible transcription repressor HrcA No genes
HspR, transcriptional repressor of DnaK operon No genes
Hypothetical radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent No genes
MiaB family protein, possibly involved in tRNA or rRNA modification No genes
Nucleoside 5-triphosphatase RdgB (dHAPTP, dITP, XTP-specific) (EC 3.6.1.15) BWI76_RS24115 -0.8
Putative coproporphyrinogen III oxidase of BS HemN-type, oxygen-independent (EC 1.3.99.22), in heat shock gene cluster No genes
RNA polymerase sigma factor RpoH BWI76_RS26385 N.D.
Radical SAM family enzyme, similar to coproporphyrinogen III oxidase, oxygen-independent, clustered with nucleoside-triphosphatase RdgB BWI76_RS24120 -2.8
Ribonuclease PH (EC 2.7.7.56) BWI76_RS27390 +1.8
Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.-) BWI76_RS24070 -2.2
Ribosomal protein L11 methyltransferase (EC 2.1.1.-) BWI76_RS25555 +1.1
Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) BWI76_RS26145 -0.5
Signal peptidase-like protein No genes
Translation elongation factor LepA BWI76_RS21335 N.D.
Xanthosine/inosine triphosphate pyrophosphatase No genes
rRNA small subunit methyltransferase I BWI76_RS24910 +1.6
tmRNA-binding protein SmpB BWI76_RS21580 +1.7

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