SEED Subsystem: Entner-Doudoroff Pathway in Ralstonia sp. UNC404CL21Col

Experiments:

Role Gene Name Plant=Sorghum_bicolor; PlantTreatment=None; Sample=soil; GrowthSubstrate=calcine_clay; Collection=outgrowth_in_LB  
⨯
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC 5.4.2.1) No genes
2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal type (EC 5.4.2.1) No genes
2-dehydro-3-deoxygluconate aldolase (EC 4.1.2-) No genes
2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45) ABZR87_RS19120 -0.0
2-dehydro-3-deoxyphosphogluconate aldolase (EC 4.1.2.14) ABZR87_RS19090 N.D.
6-phosphogluconolactonase (EC 3.1.1.31) No genes
6-phosphogluconolactonase (EC 3.1.1.31), eukaryotic type ABZR87_RS22910 -1.7
Aldehyde dehydrogenase (EC 1.2.1.3) ABZR87_RS05805 +0.1
  ABZR87_RS15990 -1.6
  ABZR87_RS16110 -0.2
  ABZR87_RS20645 +0.2
  ABZR87_RS21540 +0.0
D-glycerate 2-kinase (EC 2.7.1.-) ABZR87_RS03900 +0.5
  ABZR87_RS07545 -0.0
Enolase (EC 4.2.1.11) ABZR87_RS10470 N.D.
Glucokinase (EC 2.7.1.2) ABZR87_RS22905 +0.2
Gluconate dehydratase (EC 4.2.1.39) No genes
Gluconokinase (EC 2.7.1.12) ABZR87_RS07320 -0.2
Gluconolactonase (EC 3.1.1.17) ABZR87_RS20345 +0.4
Glucose 1-dehydrogenase (EC 1.1.1.47) ABZR87_RS14680 +0.1
Glucose dehydrogenase, PQQ-dependent (EC 1.1.5.2) No genes
Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) ABZR87_RS22915 -0.3
Hexokinase (EC 2.7.1.1) No genes
NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) ABZR87_RS01435 N.D.
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NAD) No genes
Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NADP) (EC 1.2.1.9) No genes
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, actinobacterial No genes
OpcA, an allosteric effector of glucose-6-phosphate dehydrogenase, cyanobacterial No genes
Phosphogluconate dehydratase (EC 4.2.1.12) ABZR87_RS22920 -2.3
Phosphoglycerate kinase (EC 2.7.2.3) ABZR87_RS08065 N.D.
Phosphoglycerate mutase (EC 5.4.2.1) ABZR87_RS06750 N.D.
Polyphosphate glucokinase (EC 2.7.1.63) No genes
Pyruvate kinase (EC 2.7.1.40) ABZR87_RS03905 -0.4
  ABZR87_RS08070 +0.6

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