SEED Subsystem: Glycine and Serine Utilization in Rhodospirillum rubrum S1H

Experiments:

Role Gene Name acetate; Light intensity 38 uM  
⨯
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Rru_A3051 +0.8
Cystathionine beta-synthase (EC 4.2.1.22) Rru_A0787 -0.2
Cystathionine gamma-lyase (EC 4.4.1.1) Rru_A0786 +0.1
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Rru_A2002 -0.6
  Rru_A2456 N.D.
D-serine dehydratase (EC 4.3.1.18) No genes
D-serine dehydratase transcriptional activator No genes
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) No genes
Glycine cleavage system H protein Rru_A3050 +1.4
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) Rru_A3049 +1.5
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) Rru_A3048 +0.9
L-serine dehydratase (EC 4.3.1.17) No genes
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) No genes
L-serine dehydratase, beta subunit (EC 4.3.1.17) No genes
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) Rru_A1104 N.D.
Phosphoserine phosphatase (EC 3.1.3.3) Rru_A0465 N.D.
Serine hydroxymethyltransferase (EC 2.1.2.1) Rru_A1142 +0.6
  Rru_A1827 -0.1
Serine transporter No genes
Seryl-tRNA synthetase (EC 6.1.1.11) Rru_A1770 N.D.
Threonine dehydratase, catabolic (EC 4.3.1.19) Rru_A0647 -0.6

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