SEED Subsystem: Oxidative stress in Klebsiella michiganensis M5al

Experiments:

Role Gene Name Thymine (N)  
⨯
Alkyl hydroperoxide reductase subunit C-like protein BWI76_RS06285 -0.1
Catalase (EC 1.11.1.6) BWI76_RS11755 +0.2
  BWI76_RS13925 -0.2
  BWI76_RS20010 +0.2
DNA binding protein starved cells-like peroxide resistance protein No genes
Fe2+/Zn2+ uptake regulation proteins No genes
Ferric uptake regulation protein No genes
Ferric uptake regulation protein FUR BWI76_RS08265 N.D.
Ferroxidase (EC 1.16.3.1) BWI76_RS08980 -1.0
Fumarate and nitrate reduction regulatory protein BWI76_RS16185 N.D.
Heme oxygenase HemO, associated with heme uptake No genes
Hydrogen peroxide-inducible genes activator BWI76_RS00865 -0.4
  BWI76_RS21015 -0.6
Iron-binding ferritin-like antioxidant protein BWI76_RS08980 -1.0
Iron-responsive regulator Irr No genes
Manganese superoxide dismutase (EC 1.15.1.1) BWI76_RS00705 N.D.
Metallothionein No genes
Nitrite-sensitive transcriptional repressor NsrR BWI76_RS02570 +1.8
NnrS protein involved in response to NO No genes
Non-specific DNA-binding protein Dps BWI76_RS08980 -1.0
Organic hydroperoxide resistance protein No genes
Organic hydroperoxide resistance transcriptional regulator No genes
Paraquat-inducible protein A BWI76_RS09935 -0.1
  BWI76_RS17990 -0.5
Paraquat-inducible protein B BWI76_RS09940 -0.4
  BWI76_RS09945 N.D.
  BWI76_RS17995 -0.3
Peroxidase (EC 1.11.1.7) BWI76_RS13925 -0.2
Peroxidase/catalase HPI (EC 1.11.1.6) No genes
Peroxide stress regulator No genes
Peroxide stress regulator PerR, FUR family No genes
Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) No genes
Probable peroxiredoxin (EC 1.11.1.15) No genes
Redox-sensitive transcriptional activator SoxR BWI76_RS02000 +0.2
Redox-sensitive transcriptional regulator (AT-rich DNA-binding protein) No genes
Regulatory protein SoxS BWI76_RS01995 +0.5
Rubrerythrin No genes
Superoxide dismutase (EC 1.15.1.1) No genes
Superoxide dismutase [Cu-Zn] precursor (EC 1.15.1.1) BWI76_RS16455 -0.4
Superoxide dismutase [Fe] (EC 1.15.1.1) BWI76_RS16500 +0.5
Superoxide dismutase [Mn/Fe] (EC 1.15.1.1) No genes
Superoxide dismutase [Mn] (EC 1.15.1.1) No genes
Superoxide reductase (EC 1.15.1.2) No genes
Thioredoxin peroxidase 1 (EC 1.6.4.-) No genes
Transcriptional regulator, Crp/Fnr family No genes
Transcriptional regulator, FUR family No genes
Zinc uptake regulation protein ZUR BWI76_RS01890 -0.0
bacteriophytochrome heme oxygenase BphO No genes
superoxide dismutase [Fe-Zn] (EC 1.15.1.1) No genes
transcriptional regulator, Crp/Fnr family No genes
transcriptional regulator, Fur family No genes

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