SEED Subsystem: Pyrimidine utilization in Pseudomonas fluorescens FW300-N2C3

Experiments:

Role Gene Name Thymine (N)  
⨯
Beta-ureidopropionase (EC 3.5.1.6) AO356_23105 -4.3
Dihydropyrimidinase (EC 3.5.2.2) AO356_23095 -4.7
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) AO356_23085 +0.0
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway No genes
Possible pyrimidine permease in reductive pathway AO356_23100 -2.1
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway No genes
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway No genes
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway No genes
Predicted reductase RutE in novel pyrimidine catabolism pathway No genes
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism AO356_23090 -0.1
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) AO356_07965 -0.0
  AO356_23080 -0.1
Uracil permease AO356_16560 -0.0

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Or view this subsystem at the SEED (slow)