SEED Subsystem: Serine-glyoxylate cycle in Dechlorosoma suillum PS

Experiments:

Role Gene Name propionate (C)  
⨯
3-ketoacyl-CoA thiolase (EC 2.3.1.16) No genes
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) Dsui_0640 N.D.
5-FCL-like protein, but predicted not to be 5-formyltetrahydrofolate cyclo-ligase (5-FCL) No genes
5-formyltetrahydrofolate cyclo-ligase (EC 6.3.3.2) Dsui_0682 N.D.
Acetoacetyl-CoA reductase (EC 1.1.1.36) Dsui_0780 -0.1
  Dsui_2538 -0.0
Acetyl-CoA acetyltransferase (EC 2.3.1.9) No genes
Aconitate hydratase (EC 4.2.1.3) Dsui_2347 -1.2
Citrate synthase (EC 2.3.3.1) No genes
Citrate synthase (si) (EC 2.3.3.1) Dsui_2216 N.D.
Enolase (EC 4.2.1.11) Dsui_2317 N.D.
Formate--tetrahydrofolate ligase (EC 6.3.4.3) No genes
Formiminotetrahydrofolate cyclodeaminase (EC 4.3.1.4) No genes
Fumarate hydratase class I, aerobic (EC 4.2.1.2) Dsui_2001 N.D.
Fumarate hydratase class I, anaerobic (EC 4.2.1.2) No genes
GDSL-like lipase/acylhydrolase No genes
Glycerate kinase (EC 2.7.1.31) No genes
Isocitrate lyase (EC 4.1.3.1) Dsui_0011 -0.9
Malate dehydrogenase (EC 1.1.1.37) Dsui_2209 N.D.
Malate synthase-related protein No genes
Malyl-CoA lyase (EC 4.1.3.24) No genes
Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9) Dsui_0093 N.D.
Methylcrotonyl-CoA carboxylase biotin-containing subunit (EC 6.4.1.4) Dsui_0982 -0.4
Methylcrotonyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.4) Dsui_0980 -0.1
Methylene tetrahydromethanopterin dehydrogenase (EC 1.5.99.9) No genes
Methylenetetrahydrofolate dehydrogenase (NADP+) (EC 1.5.1.5) Dsui_0093 N.D.
Methylmalonyl-CoA mutase (EC 5.4.99.2) Dsui_0519 -4.8
  Dsui_1105 -0.9
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) No genes
Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) No genes
Phosphoglyceromutase No genes
Propionyl-CoA carboxylase beta chain (EC 6.4.1.3) No genes
Propionyl-CoA carboxylase carboxyl transferase subunit (EC 6.4.1.3) Dsui_0517 -4.1
Putative malate dehydrogenase (EC 1.1.1.37), similar to archaeal MJ1425 No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) Dsui_1265 N.D.
  Dsui_2254 -1.2
Serine--glyoxylate aminotransferase (EC 2.6.1.45) No genes
Serine--pyruvate aminotransferase (EC 2.6.1.51) No genes
Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase No genes
Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) Dsui_2213 N.D.
Succinate dehydrogenase iron-sulfur protein (EC 1.3.99.1) Dsui_2214 N.D.
Succinyl-CoA ligase [ADP-forming] alpha chain (EC 6.2.1.5) Dsui_1446 -2.9
Succinyl-CoA ligase [ADP-forming] beta chain (EC 6.2.1.5) Dsui_1445 -2.9
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) No genes
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B (EC 2.8.3.5) No genes
crotonyl-CoA reductase No genes
cytosolic long-chain acyl-CoA thioester hydrolase family protein Dsui_0310 +0.5
decarboxylase No genes
isobutyryl-CoA dehydrogenase No genes
low-specificity D-threonine aldolase No genes
polyhydroxyalkanoate synthesis repressor PhaR No genes
putative glycerate kinase No genes
putative isobutyryl-CoA mutase, chain B No genes

Or select organism:

Or view this subsystem at the SEED (slow)