SEED Subsystem: tRNA processing in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name molybdate 0.25 M  
⨯
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) Pf6N2E2_2870 +0.3
Ribonuclease D (EC 3.1.26.3) Pf6N2E2_2727 +1.7
Ribonuclease P protein component (EC 3.1.26.5) Pf6N2E2_4200 N.D.
Ribonuclease PH (EC 2.7.7.56) Pf6N2E2_4365 +1.4
Ribonuclease T (EC 3.1.13.-) Pf6N2E2_5587 N.D.
Ribonuclease Z (EC 3.1.26.11) No genes
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) Pf6N2E2_3041 -0.4
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) Pf6N2E2_2980 +0.2
  Pf6N2E2_70 +0.1
tRNA pseudouridine synthase B (EC 4.2.1.70) Pf6N2E2_3351 -0.4
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase Pf6N2E2_5018 +0.4
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) Pf6N2E2_3159 N.D.
tRNAHis-5'-guanylyltransferase No genes

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