SEED Subsystem: Siderophore Pyoverdine in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name molybdate 0.25 M  
ABC transporter in pyoverdin gene cluster, ATP-binding component Pf6N2E2_6067 +0.2
ABC transporter in pyoverdin gene cluster, periplasmic component Pf6N2E2_6065 -0.1
ABC transporter in pyoverdin gene cluster, permease component Pf6N2E2_6066 +0.4
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching Pf6N2E2_1086 -0.3
Antisigma transmembrane sensor FpvR Pf6N2E2_30 -0.0
Cation ABC transporter, periplasmic cation-binding protein, PA2407 homolog No genes
Hypothetical MbtH-like protein, PA2412 homolog No genes
Hypothetical protein PvdX No genes
Hypothetical protein PvdY No genes
Hypothetical protein in pyoverdin gene cluster No genes
Hypothetical protein in pyoverdin gene cluster, PA2405 homolog No genes
Hypothetical protein in pyoverdin gene cluster, PA2406 homolog No genes
L-ornithine 5-monooxygenase (EC 1.13.12.-), PvdA of pyoverdin biosynthesis Pf6N2E2_22 +1.2
Non-ribosomal peptide synthetase modules, pyoverdine Pf6N2E2_3 +1.0
Non-ribosomal peptide synthetase modules, pyoverdine?? Pf6N2E2_1629 +0.1
Outer membrane ferripyoverdine receptor No genes
Outer membrane ferripyoverdine receptor FpvA, TonB-dependent No genes
Outer membrane ferripyoverdine receptor FpvB, for Type I pyoverdine No genes
Outer membrane porin, coexpressed with pyoverdine biosynthesis regulon No genes
Outer membrane pyoverdine eflux protein Pf6N2E2_18 -0.3
Pirin-related protein, coexpressed with pyoverdine biosynthesis regulon No genes
Probable hydrolase, coexpressed with pyoverdine biosynthesis regulon No genes
Probable thioesterase involved in non-ribosomal peptide biosynthesis, PA2411 homolog No genes
Putative dipeptidase, pyoverdin biosynthesis PvdM Pf6N2E2_14 +0.4
Putative iron-regulated membrane protein, PA2403 homolog No genes
Putative thiamine pyrophosphate-requiring enzyme, PA2404 homolog No genes
PvdE, pyoverdine ABC export system, fused ATPase and permease components Pf6N2E2_10 +0.6
PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV) Pf6N2E2_11 N.D.
  Pf6N2E2_12 -0.1
Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76) Pf6N2E2_2395 +0.5
Pyoverdin biosynthesis protein PvdN, putative aminotransferase, class V Pf6N2E2_13 -0.5
Pyoverdine biosynthesis related protein PvdP Pf6N2E2_15 -0.1
Pyoverdine chromophore precursor synthetase PvdL Pf6N2E2_2403 +0.9
Pyoverdine efflux carrier and ATP binding protein Pf6N2E2_19 -0.4
Pyoverdine sidechain non-ribosomal peptide synthetase PvdD No genes
Pyoverdine sidechain non-ribosomal peptide synthetase PvdI No genes
Pyoverdine sidechain non-ribosomal peptide synthetase PvdJ No genes
Pyoverdine synthetase PvdF, N5-hydroxyornithine formyltransferase No genes
Sigma factor PvdS, controling pyoverdin biosynthesis Pf6N2E2_2404 +1.4
Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis Pf6N2E2_21 +0.9
Thioesterase PvdG involved in non-ribosomal peptide biosynthesis No genes
pyoverdine-specific efflux macA-like protein Pf6N2E2_20 -0.7

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