SEED Subsystem: Photorespiration (oxidative C2 cycle) in Klebsiella michiganensis M5al

Experiments:

Role Gene Name Gly-DL-Asp (N)  
⨯
2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60) BWI76_RS07000 -0.1
  BWI76_RS24825 -0.2
2-oxoglutarate/malate translocator BWI76_RS04375 -0.2
  BWI76_RS16110 -0.1
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) BWI76_RS23880 -5.9
Catalase (EC 1.11.1.6) BWI76_RS11755 -0.8
  BWI76_RS13925 +0.3
  BWI76_RS20010 +0.3
D-Lactate dehydrogenase, cytochrome c-dependent (EC 1.1.2.4) No genes
D-glycerate 3-kinase (EC 2.7.1.31), plant type No genes
Dihydrolipoamide dehydrogenase (EC 1.8.1.4) No genes
Expressed protein possibly involved in photorespiration No genes
Glycerate kinase (EC 2.7.1.31) BWI76_RS07025 +0.1
  BWI76_RS22820 -0.7
  BWI76_RS23730 -0.5
  BWI76_RS24820 +0.5
Glycine cleavage system H protein BWI76_RS23875 -1.5
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) BWI76_RS23870 -2.9
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE No genes
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF No genes
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD BWI76_RS17050 +0.3
Glycolate oxidase (EC 1.1.3.15) No genes
Glycolate permease No genes
Glyoxylate carboligase (EC 4.1.1.47) BWI76_RS06990 -0.5
Hydroxypyruvate reductase (EC 1.1.1.81) No genes
L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) BWI76_RS10590 -0.1
Malate synthase (EC 2.3.3.9) BWI76_RS01660 -0.3
Malate synthase G (EC 2.3.3.9) No genes
Malyl-CoA lyase (EC 4.1.3.24) No genes
Phosphoglycolate phosphatase (EC 3.1.3.18) BWI76_RS26065 +0.9
Ribulose bisphosphate carboxylase (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase large chain (EC 4.1.1.39) No genes
Ribulose bisphosphate carboxylase small chain (EC 4.1.1.39) No genes
Ribulose-1,5-bisphosphate carboxylase, Type III (EC 4.1.1.39) No genes
Serine hydroxymethyltransferase (EC 2.1.2.1) BWI76_RS21225 N.D.
Serine--glyoxylate aminotransferase (EC 2.6.1.45) No genes

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