SEED Subsystem: Pyrimidine utilization in Enterobacter sp. TBS_079

Experiments:

Role Gene Name 1X LB plate, 1:1 coculture with Lysobacter soli TBS_075  
⨯
Beta-ureidopropionase (EC 3.5.1.6) No genes
Dihydropyrimidinase (EC 3.5.2.2) No genes
Dihydropyrimidine dehydrogenase [NADP+] (EC 1.3.1.2) No genes
Possible hydrolase or acyltransferase RutD in novel pyrimidine catabolism pathway MPMX20_01696 -0.3
Possible pyrimidine permease in reductive pathway No genes
Possible ring-opening amidohydrolase RutC in novel pyrimidine catabolism pathway No genes
Predicted amidohydrolase RutB in novel pyrimidine catabolism pathway MPMX20_01698 +0.2
Predicted flavin reductase RutF in novel pyrimidine catabolism pathway MPMX20_01694 +0.8
Predicted monooxygenase RutA in novel pyrimidine catabolism pathway MPMX20_01699 -0.4
Predicted reductase RutE in novel pyrimidine catabolism pathway MPMX20_01695 -0.8
Pyridine nucleotide-disulphide oxidoreductase associated with reductive pyrimidine catabolism No genes
Pyrimidine ABC transporter, ATP-binding protein No genes
Pyrimidine ABC transporter, substrate-binding component No genes
Pyrimidine ABC transporter, transmembrane component 1 No genes
Pyrimidine ABC transporter, transmembrane component 2 No genes
Transcriptional regulator RutR of pyrimidine catabolism (TetR family) MPMX20_00061 +0.4
  MPMX20_01700 +0.1
Uracil permease MPMX20_01693 -1.4
  MPMX20_03351 -0.1

Or select organism:

Or view this subsystem at the SEED (slow)