SEED Subsystem: DNA-replication in Vibrio cholerae E7946 ATCC 55056

Experiments:

Role Gene Name LB_Anaerobic_18HR_ZN20A  
⨯
ATP-dependent DNA helicase RecG (EC 3.6.1.-) CSW01_13680 -1.3
ATP-dependent DNA helicase RecQ CSW01_01045 -0.5
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA CSW01_00055 N.D.
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) CSW01_09250 -1.6
DNA polymerase I (EC 2.7.7.7) CSW01_00560 -1.1
DNA polymerase II (EC 2.7.7.7) CSW01_06130 -0.0
DNA polymerase III alpha subunit (EC 2.7.7.7) CSW01_11435 N.D.
DNA polymerase III beta subunit (EC 2.7.7.7) CSW01_00060 N.D.
DNA polymerase III chi subunit (EC 2.7.7.7) CSW01_12685 -0.1
DNA polymerase III delta prime subunit (EC 2.7.7.7) CSW01_10065 N.D.
DNA polymerase III delta subunit (EC 2.7.7.7) CSW01_04875 N.D.
DNA polymerase III epsilon subunit (EC 2.7.7.7) CSW01_06520 +0.2
  CSW01_11380 N.D.
DNA polymerase III psi subunit (EC 2.7.7.7) CSW01_03455 N.D.
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) CSW01_05365 N.D.
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) CSW01_02750 N.D.
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN CSW01_04395 -0.3
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) CSW01_11775 -1.7
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) CSW01_11780 -0.7
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) CSW01_11785 -0.6
Helicase PriA essential for oriC/DnaA-independent DNA replication CSW01_13530 N.D.
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA CSW01_09245 -4.7
Holliday junction DNA helicase RuvB CSW01_09240 -3.9
Primosomal protein I No genes
Primosomal replication protein N CSW01_01930 N.D.
Primosomal replication protein N prime prime CSW01_09300 +0.1
RecA protein CSW01_02875 -3.5
Recombination protein RecR CSW01_05375 -0.6
Replicative DNA helicase (EC 3.6.1.-) CSW01_01950 N.D.
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) CSW01_12240 -0.6
Transcription-repair coupling factor CSW01_09445 -0.5

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