| Role | Gene | Name | 1-ethyl-3-methylimidazolium chloride 200 mM | |
| | | ⨯ | |
| ABC transporter in pyoverdin gene cluster, ATP-binding component | AO356_20895 | | -0.6 | |
| ABC transporter in pyoverdin gene cluster, periplasmic component | AO356_20885 | | -2.1 | |
| ABC transporter in pyoverdin gene cluster, permease component | AO356_20890 | | -1.0 | |
| Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching | AO356_26065 | | +4.1 | |
| Antisigma transmembrane sensor FpvR | AO356_21220 | | -0.3 | |
| Cation ABC transporter, periplasmic cation-binding protein, PA2407 homolog | No genes | | | |
| Hypothetical MbtH-like protein, PA2412 homolog | No genes | | | |
| Hypothetical protein PvdX | No genes | | | |
| Hypothetical protein PvdY | No genes | | | |
| Hypothetical protein in pyoverdin gene cluster | No genes | | | |
| Hypothetical protein in pyoverdin gene cluster, PA2405 homolog | No genes | | | |
| Hypothetical protein in pyoverdin gene cluster, PA2406 homolog | No genes | | | |
| L-ornithine 5-monooxygenase (EC 1.13.12.-), PvdA of pyoverdin biosynthesis | AO356_21180 | | +4.3 | |
| Non-ribosomal peptide synthetase modules, pyoverdine | AO356_21100 | | +4.3 | |
| | AO356_24265 | | -0.2 | |
| | AO356_28230 | | N.D. | |
| Non-ribosomal peptide synthetase modules, pyoverdine?? | AO356_28210 | | +0.0 | |
| | AO356_28215 | | +0.1 | |
| | AO356_28220 | | -0.1 | |
| | AO356_28265 | | -0.0 | |
| | AO356_28270 | | -0.0 | |
| | AO356_29920 | | -0.1 | |
| | AO356_29925 | | -0.1 | |
| Outer membrane ferripyoverdine receptor | AO356_22425 | | +0.1 | |
| Outer membrane ferripyoverdine receptor FpvA, TonB-dependent | No genes | | | |
| Outer membrane ferripyoverdine receptor FpvB, for Type I pyoverdine | No genes | | | |
| Outer membrane porin, coexpressed with pyoverdine biosynthesis regulon | No genes | | | |
| Outer membrane pyoverdine eflux protein | AO356_21160 | | -0.1 | |
| Pirin-related protein, coexpressed with pyoverdine biosynthesis regulon | No genes | | | |
| Probable hydrolase, coexpressed with pyoverdine biosynthesis regulon | No genes | | | |
| Probable thioesterase involved in non-ribosomal peptide biosynthesis, PA2411 homolog | No genes | | | |
| Putative dipeptidase, pyoverdin biosynthesis PvdM | AO356_21140 | | +1.2 | |
| Putative iron-regulated membrane protein, PA2403 homolog | No genes | | | |
| Putative thiamine pyrophosphate-requiring enzyme, PA2404 homolog | No genes | | | |
| PvdE, pyoverdine ABC export system, fused ATPase and permease components | AO356_21125 | | -2.0 | |
| PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV) | AO356_21130 | | -0.3 | |
| Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76) | AO356_02850 | | +1.3 | |
| Pyoverdin biosynthesis protein PvdN, putative aminotransferase, class V | AO356_21135 | | -0.5 | |
| Pyoverdine biosynthesis related protein PvdP | AO356_21150 | | +3.0 | |
| Pyoverdine chromophore precursor synthetase PvdL | AO356_02890 | | +4.2 | |
| Pyoverdine efflux carrier and ATP binding protein | AO356_21165 | | -1.4 | |
| Pyoverdine sidechain non-ribosomal peptide synthetase PvdD | No genes | | | |
| Pyoverdine sidechain non-ribosomal peptide synthetase PvdI | No genes | | | |
| Pyoverdine sidechain non-ribosomal peptide synthetase PvdJ | No genes | | | |
| Pyoverdine synthetase PvdF, N5-hydroxyornithine formyltransferase | No genes | | | |
| Sigma factor PvdS, controling pyoverdin biosynthesis | AO356_02895 | | +4.4 | |
| Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis | AO356_21175 | | +2.6 | |
| Thioesterase PvdG involved in non-ribosomal peptide biosynthesis | No genes | | | |
| pyoverdine-specific efflux macA-like protein | AO356_21170 | | -0.6 | |