SEED Subsystem: De Novo Pyrimidine Synthesis in Pseudomonas fluorescens FW300-N1B4

Experiments:

Role Gene Name Minimal media pH9  
⨯
Aspartate carbamoyltransferase (EC 2.1.3.2) Pf1N1B4_2347 N.D.
Aspartate carbamoyltransferase regulatory chain (PyrI) No genes
Carbamoyl-phosphate synthase large chain (EC 6.3.5.5) Pf1N1B4_1172 N.D.
Carbamoyl-phosphate synthase large chain A (EC 6.3.5.5) No genes
Carbamoyl-phosphate synthase large chain B (EC 6.3.5.5) No genes
Carbamoyl-phosphate synthase small chain (EC 6.3.5.5) Pf1N1B4_1173 N.D.
Dihydroorotase (EC 3.5.2.3) Pf1N1B4_1985 -0.1
  Pf1N1B4_2346 N.D.
  Pf1N1B4_744 N.D.
Dihydroorotate dehydrogenase (EC 1.3.3.1) Pf1N1B4_3842 N.D.
Dihydroorotate dehydrogenase electron transfer subunit (EC 1.3.3.1) No genes
Dihydroorotate dehydrogenase, catalytic subunit (EC 1.3.3.1) No genes
Orotate phosphoribosyltransferase (EC 2.4.2.10) Pf1N1B4_2120 N.D.
Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) Pf1N1B4_514 N.D.
Pyrimidine operon regulatory protein PyrR Pf1N1B4_2348 -1.4
Uracil permease Pf1N1B4_2933 +0.8
Uracil phosphoribosyltransferase (EC 2.4.2.9) Pf1N1B4_2348 -1.4
  Pf1N1B4_2934 +1.4

Or select organism:

Or view this subsystem at the SEED (slow)