SEED Subsystem: Glycine and Serine Utilization in Pseudomonas fluorescens FW300-N2E3

Experiments:

Role Gene Name Gly-Glu (N)  
⨯
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) AO353_03510 -2.7
  AO353_08735 -0.1
Cystathionine beta-synthase (EC 4.2.1.22) AO353_23290 -0.5
Cystathionine gamma-lyase (EC 4.4.1.1) AO353_23295 -0.2
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) AO353_08510 -0.6
  AO353_15000 +0.4
  AO353_17865 +0.1
  AO353_21585 +0.2
  AO353_23780 +0.0
  AO353_28220 -0.1
D-serine dehydratase (EC 4.3.1.18) AO353_25210 -0.1
D-serine dehydratase transcriptional activator AO353_25215 -0.2
D-serine permease DsdX AO353_25205 -0.1
D-serine/D-alanine/glycine transporter AO353_16120 +0.1
  AO353_25190 -0.1
Glycerate kinase (EC 2.7.1.31) AO353_03605 -1.4
  AO353_26900 +0.4
Glycine cleavage system H protein AO353_03495 -1.4
  AO353_08730 -0.0
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) AO353_03500 -2.4
  AO353_08720 +0.1
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) No genes
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) No genes
L-serine dehydratase (EC 4.3.1.17) AO353_03505 +0.0
  AO353_07775 +0.1
  AO353_15500 +0.4
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) No genes
L-serine dehydratase, beta subunit (EC 4.3.1.17) No genes
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) AO353_02075 -1.2
  AO353_10515 +0.1
Phosphoserine phosphatase (EC 3.1.3.3) AO353_02430 -0.0
  AO353_08475 -3.6
  AO353_13070 -2.4
  AO353_22480 +0.0
Serine hydroxymethyltransferase (EC 2.1.2.1) AO353_07665 -0.0
  AO353_10495 -0.0
  AO353_10530 -0.1
  AO353_14020 N.D.
  AO353_14025 -0.1
  AO353_29335 +0.1
Serine transporter AO353_15495 +0.1
  AO353_21595 +0.3
Seryl-tRNA synthetase (EC 6.1.1.11) AO353_24200 -0.4
  AO353_27630 N.D.
Threonine dehydratase, catabolic (EC 4.3.1.19) No genes

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