SEED Subsystem: DNA-binding regulatory proteins, strays in Pseudomonas fluorescens FW300-N1B4

Experiments:

Role Gene Name Uridine (N)  
⨯
Alkanesulfonate utilization operon LysR-family regulator CbI No genes
Aromatic hydrocarbon utilization transcriptional regulator CatR (LysR family) Pf1N1B4_5806 +0.5
Cyn operon transcriptional activator Pf1N1B4_3364 -0.1
  Pf1N1B4_4118 -0.3
  Pf1N1B4_4442 -0.0
  Pf1N1B4_488 +0.5
Cys regulon transcriptional activator CysB Pf1N1B4_16 -0.0
  Pf1N1B4_283 N.D.
GltC, transcription activator of glutamate synthase operon No genes
Hydrogen peroxide-inducible genes activator Pf1N1B4_1211 +0.3
  Pf1N1B4_1672 -0.1
  Pf1N1B4_2106 +0.5
LysR family transcriptional regulator PA0133 Pf1N1B4_1240 -1.6
LysR family transcriptional regulator PA0191 No genes
LysR family transcriptional regulator PA0739 No genes
LysR family transcriptional regulator PA1145 No genes
LysR family transcriptional regulator PA2758 No genes
LysR family transcriptional regulator PA2877 No genes
LysR family transcriptional regulator PA3398 Pf1N1B4_3152 -0.6
LysR family transcriptional regulator PA4989 Pf1N1B4_1450 -0.5
LysR family transcriptional regulator PA5218 No genes
LysR family transcriptional regulator PA5437 Pf1N1B4_2009 -1.6
LysR family transcriptional regulator STM2281 Pf1N1B4_5005 -0.3
LysR family transcriptional regulator STM3121 No genes
LysR family transcriptional regulator YbhD Pf1N1B4_4462 -0.5
LysR family transcriptional regulator YcjZ No genes
LysR family transcriptional regulator YdcI Pf1N1B4_5585 -0.1
LysR family transcriptional regulator YfeR No genes
LysR family transcriptional regulator YfiE No genes
LysR family transcriptional regulator YhjC No genes
LysR family transcriptional regulator YneJ No genes
LysR family transcriptional regulator YnfL Pf1N1B4_1530 +0.0
LysR family transcriptional regulator lrhA Pf1N1B4_4421 N.D.
LysR family transcriptional regulator near succinyl-CoA:3-ketoacid-coenzyme A transferase Pf1N1B4_5832 N.D.
Nitrogen assimilation regulatory protein Nac No genes
Transcriptional activator GpuR No genes
Transcriptional activator protein LysR No genes
Transcriptional regulator GbuR Pf1N1B4_524 +0.1
Xanthosine operon regulatory protein XapR, LysR family No genes

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