SEED Subsystem: Glycine and Serine Utilization in Acidovorax sp. GW101-3H11

Experiments:

Role Gene Name L-Serine (N)  
⨯
2-amino-3-ketobutyrate coenzyme A ligase (EC 2.3.1.29) No genes
Aminomethyltransferase (glycine cleavage system T protein) (EC 2.1.2.10) Ac3H11_165 -0.1
Cystathionine beta-synthase (EC 4.2.1.22) No genes
Cystathionine gamma-lyase (EC 4.4.1.1) No genes
D-3-phosphoglycerate dehydrogenase (EC 1.1.1.95) Ac3H11_142 +0.0
  Ac3H11_1947 -0.0
  Ac3H11_2341 +0.2
  Ac3H11_2395 -1.9
  Ac3H11_3017 -0.1
  Ac3H11_4790 -0.1
D-serine dehydratase (EC 4.3.1.18) Ac3H11_4130 -0.0
D-serine dehydratase transcriptional activator Ac3H11_4131 +0.2
D-serine permease DsdX No genes
D-serine/D-alanine/glycine transporter No genes
Glycerate kinase (EC 2.7.1.31) No genes
Glycine cleavage system H protein Ac3H11_166 +0.0
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P protein) (EC 1.4.4.2) Ac3H11_167 +0.3
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P1 protein) (EC 1.4.4.2) Ac3H11_1554 -0.0
Glycine dehydrogenase [decarboxylating] (glycine cleavage system P2 protein) (EC 1.4.4.2) Ac3H11_1553 -0.0
L-serine dehydratase (EC 4.3.1.17) Ac3H11_929 -3.7
L-serine dehydratase 1 (EC 4.3.1.17) No genes
L-serine dehydratase, alpha subunit (EC 4.3.1.17) No genes
L-serine dehydratase, beta subunit (EC 4.3.1.17) No genes
Monoamine oxidase (1.4.3.4) No genes
Phosphoserine aminotransferase (EC 2.6.1.52) Ac3H11_2573 N.D.
Phosphoserine phosphatase (EC 3.1.3.3) Ac3H11_1039 N.D.
  Ac3H11_1314 N.D.
Serine hydroxymethyltransferase (EC 2.1.2.1) Ac3H11_2921 N.D.
Serine transporter No genes
Seryl-tRNA synthetase (EC 6.1.1.11) Ac3H11_1769 N.D.
Threonine dehydratase, catabolic (EC 4.3.1.19) Ac3H11_2427 -0.1
  Ac3H11_37 -0.0

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