SEED Subsystem: Flagellum in Pseudomonas fluorescens FW300-N2E3

Experiments:

Role Gene Name Cholin acetate 19 mM  
⨯
Flagellar L-ring protein FlgH AO353_18605 +0.1
Flagellar M-ring protein FliF AO353_18680 +1.3
Flagellar P-ring protein FlgI AO353_18610 +0.0
Flagellar assembly protein FliH AO353_18690 +0.4
Flagellar basal-body P-ring formation protein FlgA AO353_02875 +0.1
Flagellar basal-body rod modification protein FlgD AO353_02850 +0.2
Flagellar basal-body rod protein FlgB AO353_02860 +0.2
Flagellar basal-body rod protein FlgC AO353_02855 +0.3
Flagellar basal-body rod protein FlgF AO353_18595 +0.1
Flagellar basal-body rod protein FlgG AO353_18600 +0.2
Flagellar biosynthesis protein FlgN AO353_02885 +0.1
Flagellar biosynthesis protein FlhA AO353_18770 +1.1
Flagellar biosynthesis protein FlhB AO353_18760 +0.5
Flagellar biosynthesis protein FlhF AO353_18775 +3.0
Flagellar biosynthesis protein FliC No genes
Flagellar biosynthesis protein FliL AO353_08805 -0.6
  AO353_18725 +0.6
Flagellar biosynthesis protein FliO No genes
Flagellar biosynthesis protein FliP AO353_18745 +0.5
Flagellar biosynthesis protein FliQ AO353_18740 N.D.
  AO353_18750 +0.7
Flagellar biosynthesis protein FliR AO353_18755 +0.6
Flagellar biosynthesis protein FliS AO353_18650 -0.2
Flagellar biosynthesis protein FliT No genes
Flagellar biosynthesis protein FliZ No genes
Flagellar hook protein FlgE AO353_02845 +0.4
Flagellar hook-associated protein 3 No genes
Flagellar hook-associated protein FlgK AO353_18620 +0.2
Flagellar hook-associated protein FlgL AO353_18625 -0.2
Flagellar hook-associated protein FliD AO353_18645 -0.1
Flagellar hook-basal body complex protein FliE AO353_18675 +0.8
Flagellar hook-length control protein FliK AO353_18720 +0.2
Flagellar motor rotation protein MotA AO353_13090 -0.3
  AO353_18810 -0.1
Flagellar motor rotation protein MotB AO353_13095 -0.3
  AO353_18815 +0.1
Flagellar motor switch protein FliG AO353_18685 +0.9
Flagellar motor switch protein FliM AO353_18730 +1.4
Flagellar motor switch protein FliN AO353_18735 N.D.
Flagellar protein FlbB No genes
Flagellar protein FlbD No genes
Flagellar protein FlgJ [peptidoglycan hydrolase] (EC 3.2.1.-) AO353_18615 +0.3
Flagellar protein FlhE No genes
Flagellar protein FliJ AO353_18700 -0.4
Flagellar regulatory protein FleQ AO353_18660 -0.6
  AO353_18670 +0.5
Flagellar sensor histidine kinase FleS AO353_18665 +0.2
Flagellar synthesis regulator FleN AO353_18780 -1.1
Flagellar trans-acting factor FliX No genes
Flagellar transcriptional activator FlhC No genes
Flagellar transcriptional activator FlhD No genes
Flagellin protein FlaA No genes
Flagellin protein FlaB AO353_18635 -0.1
Flagellin protein FlaC No genes
Flagellin protein FlaD No genes
Flagellin protein FlaE No genes
Flagellin protein FlaF No genes
Flagellin protein FlaG AO353_18640 +0.0
Flagellum-specific ATP synthase FliI AO353_18695 +0.4
Negative regulator of flagellin synthesis No genes
Negative regulator of flagellin synthesis FlgM AO353_02880 N.D.
RNA polymerase sigma factor RpoD AO353_07385 N.D.
RNA polymerase sigma factor for flagellar operon AO353_18785 +0.1
RNA polymerase sigma-54 factor RpoN AO353_05180 N.D.
  AO353_20305 N.D.

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