| Role | Gene | Name | nitrogen source nitrate 5mM | |
| | | ⨯ | |
| 2H phosphoesterase superfamily protein Bsu1186 (yjcG) | No genes | | | |
| 5-aminolevulinate synthase (EC 2.3.1.37) | No genes | | | |
| Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases, YtcI homolog | No genes | | | |
| Coproporphyrinogen III oxidase, aerobic (EC 1.3.3.3) | IAI47_05360 | | N.D. | |
| Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22) | IAI47_00445 | | +0.0 | |
| Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative | No genes | | | |
| Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22), divergent, putative 2 | No genes | | | |
| Cytochrome c-type biogenesis protein CcdA (DsbD analog) | No genes | | | |
| Cytochrome c-type biogenesis protein CcsA/ResC | No genes | | | |
| DUF1801 domain-containing protein | No genes | | | |
| Ferrochelatase, protoheme ferro-lyase (EC 4.99.1.1) | IAI47_14440 | | +0.1 | |
| | IAI47_21065 | | -0.1 | |
| GNAT family acetyltransferase YjcF | No genes | | | |
| Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) | IAI47_15590 | | N.D. | |
| Glutamyl-tRNA reductase (EC 1.2.1.70) | IAI47_11275 | | N.D. | |
| HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase | No genes | | | |
| Homolog of E. coli HemY protein | No genes | | | |
| Hypothetical membrane protein, possible involvement in cytochrome functioning/assembly | No genes | | | |
| Hypothetical protein Q, similar to Chlorite dismutase | No genes | | | |
| Hypothetical protein SAV1831 | No genes | | | |
| Hypothetical protein SAV1869 | No genes | | | |
| Hypothetical protein, ydbS homolog | No genes | | | |
| Hypothetical protein, ydbT homolog | No genes | | | |
| Hypothetical, related to broad specificity phosphatases COG0406 | No genes | | | |
| Methyltransferase (EC 2.1.1.-) colocalized with Q | No genes | | | |
| Periplasmic/membrane protein associated with DUF414 | No genes | | | |
| Porphobilinogen deaminase (EC 2.5.1.61) | IAI47_18425 | | N.D. | |
| Porphobilinogen synthase (EC 4.2.1.24) | IAI47_01425 | | N.D. | |
| Possibly related to ydbT | No genes | | | |
| Precorrin-2 oxidase (EC 1.3.1.76) | IAI47_04175 | | -2.2 | |
| Protein of unknown function DUF414 | IAI47_00440 | | +0.4 | |
| Protoporphyrinogen IX oxidase, aerobic (EC 1.3.3.4) | No genes | | | |
| Protoporphyrinogen IX oxidase, oxygen-independent, HemG (EC 1.3.-.-) | IAI47_18210 | | N.D. | |
| Putative acetyl esterase YjcH (EC 3.1.1.-) | No genes | | | |
| Putative lipoprotein SAV1865 | No genes | | | |
| Putative membrane protein Q2 colocalized with Q | No genes | | | |
| Putative nitroreductase family protein SACOL0874 | No genes | | | |
| Putative oxidoreductase ferredoxin-type protein, clusters with CPO | No genes | | | |
| Ribonuclease D (EC 3.1.26.3) | IAI47_08840 | | +0.0 | |
| Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) | No genes | | | |
| Sirohydrochlorin ferrochelatase (EC 4.99.1.4) | IAI47_04175 | | -2.2 | |
| Small hypothetical protein Hyp1 | No genes | | | |
| Sua5 YciO YrdC YwlC family protein | No genes | | | |
| Uncharacterized SAV1743 homolog | No genes | | | |
| Uncharacterized protein Q1 colocalized with Q | No genes | | | |
| Uncharacterized protein UPF0344 | No genes | | | |
| Uncharacterized protein, homolog of B.subtilis yhgC | No genes | | | |
| Uroporphyrinogen III decarboxylase (EC 4.1.1.37) | IAI47_18070 | | N.D. | |
| Uroporphyrinogen-III methyltransferase (EC 2.1.1.107) | IAI47_04175 | | -2.2 | |
| | IAI47_11160 | | -2.4 | |
| Uroporphyrinogen-III synthase (EC 4.2.1.75) | IAI47_18430 | | N.D. | |
| Uroporphyrinogen-III synthase, divergent, Flavobacterial type (EC 4.2.1.75) | No genes | | | |
| Uroporphyrinogen-III synthase, divergent, Francisella type (EC 4.2.1.75) | No genes | | | |
| transmembrane protein, distant homology with ydbS | No genes | | | |
| transmembrane protein, distant homology with ydbT | No genes | | | |