SEED Subsystem: Methanogenesis in Methanococcus maripaludis JJ

Experiments:

Role Gene Name Formate N-free with 2mM Adenosine  
⨯
CoB--CoM heterodisulfide reductase subunit A (EC 1.8.98.1) MMJJ_RS00855 +0.2
  MMJJ_RS05620 -1.7
CoB--CoM heterodisulfide reductase subunit B (EC 1.8.98.1) MMJJ_RS08395 +0.2
  MMJJ_RS08920 -2.8
CoB--CoM heterodisulfide reductase subunit C (EC 1.8.98.1) MMJJ_RS08400 +0.9
  MMJJ_RS08915 -2.5
F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase (EC 1.5.99.11) MMJJ_RS05145 N.D.
F420-dependent methylenetetrahydromethanopterin dehydrogenase (EC 1.5.99.9) MMJJ_RS03500 -2.3
Formylmethanofuran dehydrogenase (molybdenum) operon gene E MMJJ_RS04265 -0.0
Formylmethanofuran dehydrogenase (molybdenum) operon gene F (polyferredoxin) No genes
Formylmethanofuran dehydrogenase (molybdenum) operon gene G No genes
Formylmethanofuran dehydrogenase (molybdenum) subunit B (EC 1.2.99.5) No genes
Formylmethanofuran dehydrogenase (molybdenum) subunit C (EC 1.2.99.5) No genes
Formylmethanofuran dehydrogenase (molybdenum) subunit D (EC 1.2.99.5) No genes
Formylmethanofuran dehydrogenase (tungsten) operon gene F (polyferredoxin) MMJJ_RS07945 -2.7
Formylmethanofuran dehydrogenase (tungsten) operon gene G MMJJ_RS07940 N.D.
Formylmethanofuran dehydrogenase (tungsten) operon gene H MMJJ_RS07950 -4.0
Formylmethanofuran dehydrogenase (tungsten) subunit B (EC 1.2.99.5) MMJJ_RS00850 -0.3
Formylmethanofuran dehydrogenase (tungsten) subunit C (EC 1.2.99.5) MMJJ_RS07925 N.D.
Formylmethanofuran dehydrogenase (tungsten) subunit D (EC 1.2.99.5) MMJJ_RS07935 -1.4
Formylmethanofuran dehydrogenase subunit A (EC 1.2.99.5) MMJJ_RS07930 N.D.
Formylmethanofuran dehydrogenase subunit B (EC 1.2.99.5) No genes
Formylmethanofuran dehydrogenase subunit C (EC 1.2.99.5) No genes
Formylmethanofuran dehydrogenase subunit D (EC 1.2.99.5) No genes
Formylmethanofuran--tetrahydromethanopterin N-formyltransferase (EC 2.3.1.101) MMJJ_RS06095 N.D.
Methyl coenzyme M reductase I alpha subunit (EC 2.8.4.1) No genes
Methyl coenzyme M reductase I beta subunit (EC 2.8.4.1) No genes
Methyl coenzyme M reductase I gamma subunit (EC 2.8.4.1) No genes
Methyl coenzyme M reductase II alpha subunit (EC 2.8.4.1) No genes
Methyl coenzyme M reductase II beta subunit (EC 2.8.4.1) No genes
Methyl coenzyme M reductase II gamma subunit (EC 2.8.4.1) No genes
Methyl coenzyme M reductase alpha subunit (EC 2.8.4.1) MMJJ_RS06340 +0.2
Methyl coenzyme M reductase associated protein No genes
Methyl coenzyme M reductase beta subunit (EC 2.8.4.1) MMJJ_RS06360 N.D.
Methyl coenzyme M reductase gamma subunit (EC 2.8.4.1) MMJJ_RS06345 N.D.
Methyl coenzyme M reductase operon protein C MMJJ_RS06350 N.D.
Methyl coenzyme M reductase operon protein D MMJJ_RS06355 N.D.
N(5),N(10)-methenyltetrahydromethanopterin cyclohydrolase (EC 3.5.4.27) MMJJ_RS08220 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit A (EC 2.1.1.86) MMJJ_RS06310 N.D.
  MMJJ_RS06315 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit B (EC 2.1.1.86) MMJJ_RS06320 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit C (EC 2.1.1.86) MMJJ_RS06325 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit D (EC 2.1.1.86) MMJJ_RS06330 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit E (EC 2.1.1.86) MMJJ_RS06335 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit F (EC 2.1.1.86) MMJJ_RS06310 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit G (EC 2.1.1.86) MMJJ_RS06305 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit H (EC 2.1.1.86) MMJJ_RS06300 N.D.
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit X MMJJ_RS07410 -2.2

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