SEED Subsystem: Siderophore Pyoverdine in Pseudomonas fluorescens FW300-N2C3

Experiments:

Role Gene Name perchlorate 75 mM  
ABC transporter in pyoverdin gene cluster, ATP-binding component AO356_20895 -1.0
ABC transporter in pyoverdin gene cluster, periplasmic component AO356_20885 -2.1
ABC transporter in pyoverdin gene cluster, permease component AO356_20890 -2.4
Acyl-homoserine lactone acylase PvdQ (EC 3.5.1.-), quorum-quenching AO356_26065 -0.1
Antisigma transmembrane sensor FpvR AO356_21220 -0.3
Cation ABC transporter, periplasmic cation-binding protein, PA2407 homolog No genes
Hypothetical MbtH-like protein, PA2412 homolog No genes
Hypothetical protein PvdX No genes
Hypothetical protein PvdY No genes
Hypothetical protein in pyoverdin gene cluster No genes
Hypothetical protein in pyoverdin gene cluster, PA2405 homolog No genes
Hypothetical protein in pyoverdin gene cluster, PA2406 homolog No genes
L-ornithine 5-monooxygenase (EC 1.13.12.-), PvdA of pyoverdin biosynthesis AO356_21180 +0.2
Non-ribosomal peptide synthetase modules, pyoverdine AO356_21100 +0.1
  AO356_24265 +0.0
  AO356_28230 N.D.
Non-ribosomal peptide synthetase modules, pyoverdine?? AO356_28210 +0.1
  AO356_28215 -0.0
  AO356_28220 +0.2
  AO356_28265 -0.0
  AO356_28270 +0.2
  AO356_29920 -0.0
  AO356_29925 -0.1
Outer membrane ferripyoverdine receptor AO356_22425 -0.0
Outer membrane ferripyoverdine receptor FpvA, TonB-dependent No genes
Outer membrane ferripyoverdine receptor FpvB, for Type I pyoverdine No genes
Outer membrane porin, coexpressed with pyoverdine biosynthesis regulon No genes
Outer membrane pyoverdine eflux protein AO356_21160 -0.6
Pirin-related protein, coexpressed with pyoverdine biosynthesis regulon No genes
Probable hydrolase, coexpressed with pyoverdine biosynthesis regulon No genes
Probable thioesterase involved in non-ribosomal peptide biosynthesis, PA2411 homolog No genes
Putative dipeptidase, pyoverdin biosynthesis PvdM AO356_21140 -0.4
Putative iron-regulated membrane protein, PA2403 homolog No genes
Putative thiamine pyrophosphate-requiring enzyme, PA2404 homolog No genes
PvdE, pyoverdine ABC export system, fused ATPase and permease components AO356_21125 -2.6
PvdO, pyoverdine responsive serine/threonine kinase (predicted by OlgaV) AO356_21130 -0.6
Pyoverdin biosynthesis protein PvdH, L-2,4-diaminobutyrate:2-oxoglutarate aminotransferase (EC 2.6.1.76) AO356_02850 +0.3
Pyoverdin biosynthesis protein PvdN, putative aminotransferase, class V AO356_21135 -0.9
Pyoverdine biosynthesis related protein PvdP AO356_21150 -0.3
Pyoverdine chromophore precursor synthetase PvdL AO356_02890 +0.1
Pyoverdine efflux carrier and ATP binding protein AO356_21165 -1.4
Pyoverdine sidechain non-ribosomal peptide synthetase PvdD No genes
Pyoverdine sidechain non-ribosomal peptide synthetase PvdI No genes
Pyoverdine sidechain non-ribosomal peptide synthetase PvdJ No genes
Pyoverdine synthetase PvdF, N5-hydroxyornithine formyltransferase No genes
Sigma factor PvdS, controling pyoverdin biosynthesis AO356_02895 -0.1
Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis AO356_21175 -0.5
Thioesterase PvdG involved in non-ribosomal peptide biosynthesis No genes
pyoverdine-specific efflux macA-like protein AO356_21170 -0.5

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