SEED Subsystem: Ribosome biogenesis bacterial in Methanococcus maripaludis JJ

Experiments:

Role Gene Name H2 N-free with 2mM Adenosine  
⨯
16S rRNA processing protein RimM No genes
Dimethyladenosine transferase (EC 2.1.1.-) No genes
Inactive homolog of metal-dependent proteases, putative molecular chaperone No genes
LSU m3Psi1915 methyltransferase RlmH MMJJ_RS09010 +0.1
LSU m5C1962 methyltransferase RlmI MMJJ_RS07620 +0.9
RNA pseudouridylate synthase, group 1 No genes
Ribonuclease E (EC 3.1.26.12) No genes
Ribonuclease M5 (EC 3.1.26.8) No genes
Ribosomal large subunit pseudouridine synthase A (EC 4.2.1.70) No genes
Ribosomal large subunit pseudouridine synthase C (EC 4.2.1.70) No genes
Ribosomal large subunit pseudouridine synthase D (EC 4.2.1.70) No genes
Ribosomal protein L11 methyltransferase (EC 2.1.1.-) MMJJ_RS06135 +1.9
Ribosomal protein S6 glutaminyl transferase MMJJ_RS02960 +0.0
Ribosomal-protein-L7p-serine acetyltransferase MMJJ_RS00500 -0.9
Ribosomal-protein-S18p-alanine acetyltransferase (EC 2.3.1.-) MMJJ_RS07385 +0.5
  MMJJ_RS08255 -0.0
Ribosomal-protein-S5p-alanine acetyltransferase No genes
Similar to ribosomal large subunit pseudouridine synthase A No genes
Similar to ribosomal large subunit pseudouridine synthase A, group 2 No genes
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YhcT type No genes
Similar to ribosomal large subunit pseudouridine synthase D, Bacillus subtilis YjbO type No genes
Similar to ribosomal large subunit pseudouridine synthase D, CAC1266-type No genes
Similar to ribosomal large subunit pseudouridine synthase D, TTE1780-type No genes
hypothetical protein sometimes fused to ribosomal protein S6 glutaminyl transferase No genes
tRNA (Guanine37-N1) -methyltransferase (EC 2.1.1.31) MMJJ_RS03650 -1.4

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