SEED Subsystem: DNA-replication in Rhodopseudomonas palustris CGA009

Experiments:

Role Gene Name L-Lactate (C) with 10 mM Sodium Chloride  
⨯
ATP-dependent DNA helicase RecG (EC 3.6.1.-) TX73_013795 -0.4
ATP-dependent DNA helicase RecQ TX73_025080 +0.0
Arrested fork binding No genes
Chromosomal replication initiator protein DnaA TX73_000005 N.D.
  TX73_009540 +0.2
  TX73_015775 N.D.
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4) TX73_005650 N.D.
DNA polymerase I (EC 2.7.7.7) TX73_007560 -0.1
  TX73_024545 -0.3
DNA polymerase II (EC 2.7.7.7) No genes
DNA polymerase III alpha subunit (EC 2.7.7.7) TX73_015150 N.D.
DNA polymerase III beta subunit (EC 2.7.7.7) TX73_000010 N.D.
DNA polymerase III chi subunit (EC 2.7.7.7) TX73_015825 -1.6
DNA polymerase III delta prime subunit (EC 2.7.7.7) TX73_014380 N.D.
DNA polymerase III delta subunit (EC 2.7.7.7) TX73_001505 N.D.
DNA polymerase III epsilon subunit (EC 2.7.7.7) TX73_001565 N.D.
DNA polymerase III psi subunit (EC 2.7.7.7) No genes
DNA polymerase III subunits gamma and tau (EC 2.7.7.7) TX73_003185 N.D.
DNA polymerase III theta subunit (EC 2.7.7.7) No genes
DNA primase (EC 2.7.7.-) TX73_006605 N.D.
DNA primase (EC 2.7.7.-), phage-associated No genes
DNA primase TraC (EC 2.7.7.-) No genes
DNA repair protein RecN TX73_018240 -1.0
DNA replication protein DnaC No genes
DNA replication terminus site-binding protein No genes
Exodeoxyribonuclease V alpha chain (EC 3.1.11.5) No genes
Exodeoxyribonuclease V beta chain (EC 3.1.11.5) TX73_011430 +0.0
Exodeoxyribonuclease V gamma chain (EC 3.1.11.5) No genes
Helicase PriA essential for oriC/DnaA-independent DNA replication TX73_000940 N.D.
Helicase loader DnaI No genes
Holliday junction DNA helicase RuvA TX73_005655 N.D.
Holliday junction DNA helicase RuvB TX73_005665 N.D.
Primosomal protein I No genes
Primosomal replication protein N No genes
Primosomal replication protein N prime prime No genes
RecA protein TX73_019940 N.D.
Recombination protein RecR TX73_003195 N.D.
Replicative DNA helicase (EC 3.6.1.-) TX73_015955 N.D.
Replicative DNA helicase (EC 3.6.1.-) [SA14-24] No genes
Single-stranded-DNA-specific exonuclease RecJ (EC 3.1.-.-) TX73_012960 N.D.
Transcription-repair coupling factor TX73_013805 +0.0

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