SEED Subsystem: tRNA processing in Rhodopseudomonas palustris CGA009

Experiments:

Role Gene Name L-Lactate (C) with 10 mM Sodium Chloride  
⨯
5-carboxymethyl uridine and 5-carboxymethyl 2-thiouridine methyltransferase No genes
Ribonuclease BN (EC 3.1.-.-) No genes
Ribonuclease D (EC 3.1.26.3) TX73_015755 +1.8
Ribonuclease P protein component (EC 3.1.26.5) TX73_003275 -0.6
Ribonuclease PH (EC 2.7.7.56) TX73_001710 -0.1
Ribonuclease T (EC 3.1.13.-) No genes
Ribonuclease Z (EC 3.1.26.11) TX73_004115 +0.6
tRNA delta(2)-isopentenylpyrophosphate transferase (EC 2.5.1.8) No genes
tRNA pseudouridine 13 synthase (EC 4.2.1.-) No genes
tRNA pseudouridine 55 synthase (EC 4.2.1.70) No genes
tRNA pseudouridine synthase A (EC 4.2.1.70) TX73_003225 -3.0
  TX73_005980 -0.5
tRNA pseudouridine synthase B (EC 4.2.1.70) TX73_002255 -1.7
tRNA(Ile)-lysidine synthetase No genes
tRNA-i(6)A37 methylthiotransferase TX73_002325 -0.0
tRNA-specific adenosine-34 deaminase (EC 3.5.4.-) TX73_005975 N.D.
tRNAHis-5'-guanylyltransferase No genes

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