SEED Subsystem: NAD and NADP cofactor biosynthesis global in Xanthomonas campestris pv. campestris strain 8004

Experiments:

Role Gene Name Xantho_MME_glucose_dropout_LTH  
3-hydroxyanthranilate 3,4-dioxygenase (EC 1.13.11.6) Xcc-8004.3325.1 -2.2
ADP-ribose pyrophosphatase (EC 3.6.1.13) Xcc-8004.4216.1 -0.0
  Xcc-8004.918.1 -0.1
Amidases related to nicotinamidase No genes
C-terminal domain of CinA type S No genes
C-terminal domain of CinA type S homolog No genes
Glutamine amidotransferase chain of NAD synthetase Xcc-8004.1359.1 -2.9
Indoleamine 2,3-dioxygenase (EC 1.13.11.52) No genes
Isochorismatase (EC 3.3.2.1) of siderophore biosynthesis No genes
Kynureninase (EC 3.7.1.3) Xcc-8004.3327.1 -1.6
Kynurenine 3-monooxygenase (EC 1.14.13.9) Xcc-8004.3328.1 -1.4
Kynurenine formamidase (EC 3.5.1.9) No genes
Kynurenine formamidase, bacterial (EC 3.5.1.9) No genes
Kynurenine formamidase, yeast-type BNA7 (EC 3.5.1.9) No genes
L-Aspartate dehydrogenase (EC 1.4.1.21) No genes
L-aspartate oxidase (EC 1.4.3.16) No genes
N-Ribosylnicotinamide phosphorylase (EC 2.4.2.1) No genes
NAD kinase (EC 2.7.1.23) Xcc-8004.3334.1 N.D.
NAD pyrophosphatase, periplasmic (EC 3.6.1.22) No genes
NAD synthetase (EC 6.3.1.5) Xcc-8004.1359.1 -2.9
NAD transporter of endosymbionts, possible No genes
NMN 5'-nucleotidase, extracellular (EC 3.1.3.5) No genes
NMN phosphatase (EC 3.1.3.5) No genes
NMN synthetase (EC 6.3.1.-) No genes
NadR transcriptional regulator No genes
Niacin transporter NiaP No genes
Niacin transporter in yeast, DAL5 family No genes
Nicotinamidase (EC 3.5.1.19) Xcc-8004.2185.1 -0.0
Nicotinamidase family protein YcaC No genes
Nicotinamidase/isochorismatase family protein No genes
Nicotinamide phosphoribosyltransferase (EC 2.4.2.12) Xcc-8004.919.1 -0.1
Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1) No genes
Nicotinamide-nucleotide adenylyltransferase (EC 2.7.7.1), eukaryotic PNAT family No genes
Nicotinamide-nucleotide adenylyltransferase, NadM family (EC 2.7.7.1) Xcc-8004.918.1 -0.1
Nicotinamide-nucleotide adenylyltransferase, NadR family (EC 2.7.7.1) No genes
Nicotinate phosphoribosyltransferase (EC 2.4.2.11) Xcc-8004.4407.1 -0.1
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18) Xcc-8004.1873.1 -0.3
Nicotinate-nucleotide adenylyltransferase (EC 2.7.7.18), eukaryotic PNAT family No genes
Nicotinate-nucleotide adenylyltransferase, NadM family (EC 2.7.7.18) No genes
Nicotine adenine dinucleotide glycohydrolase (NADGH) (EC 3.2.2.5) No genes
Nudix-related transcriptional regulator NrtR No genes
Predicted N-ribosylNicotinamide CRP-like regulator No genes
Quinolinate phosphoribosyltransferase [decarboxylating] (EC 2.4.2.19) Xcc-8004.2009.1 -1.9
Quinolinate synthetase (EC 2.5.1.72) No genes
Ribosyl nicotinamide transporter, PnuC-like No genes
Ribosylnicotinamide kinase (EC 2.7.1.22) No genes
Ribosylnicotinamide kinase, eukaryotic (EC 2.7.1.22) No genes
Substrate-specific component NiaX of predicted niacin ECF transporter No genes
Transcriptional repressor for NAD biosynthesis in gram-positives No genes
Tryptophan 2,3-dioxygenase (EC 1.13.11.11) Xcc-8004.3754.1 -0.1
  Xcc-8004.3755.1 -0.3
  Xcc-8004.573.1 -1.1

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