SEED Subsystem: Deoxyribose and Deoxynucleoside Catabolism in Pseudomonas fluorescens FW300-N2E2

Experiments:

Role Gene Name inner cut, LB soft agar motility assay  
⨯
Deoxyribonucleoside regulator DeoR (transcriptional repressor) No genes
Deoxyribose operon repressor, DeoR family No genes
Deoxyribose-phosphate aldolase (EC 4.1.2.4) No genes
Nucleoside permease NupC No genes
Phosphopentomutase (EC 5.4.2.7) No genes
Predicted nucleoside ABC transporter, ATP-binding component No genes
Predicted nucleoside ABC transporter, permease 1 component No genes
Predicted nucleoside ABC transporter, permease 2 component No genes
Predicted nucleoside ABC transporter, substrate-binding component No genes
Purine nucleoside phosphorylase (EC 2.4.2.1) Pf6N2E2_4558 +0.2
Putative deoxyribonuclease YjjV Pf6N2E2_3341 -0.0
Putative deoxyribose-specific ABC transporter, ATP-binding protein No genes
Putative deoxyribose-specific ABC transporter, permease protein No genes
Pyrimidine-nucleoside phosphorylase (EC 2.4.2.2) No genes
Ribokinase (EC 2.7.1.15) Pf6N2E2_165 -0.5
Thymidine phosphorylase (EC 2.4.2.4) Pf6N2E2_3345 -1.1

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